Pseudonocardia sp. EC080610-09: AD006_12060
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Entry
AD006_12060 CDS
T04146
Name
(GenBank) hypothetical protein
KO
K11618
two-component system, NarL family, response regulator LiaR
Organism
pseq
Pseudonocardia sp. EC080610-09
Pathway
pseq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pseq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AD006_12060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pseq02022
]
AD006_12060
Two-component system [BR:
pseq02022
]
NarL family
LiaS-LiaR (cell wall stress response)
AD006_12060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Response_reg
Sigma70_r4_2
Sigma70_r4
HTH_7
DUF6547
Motif
Other DBs
NCBI-ProteinID:
ALL75854
LinkDB
All DBs
Position
2533269..2533934
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AA seq
221 aa
AA seq
DB search
MTGASPILIVDDHELVGSALALNLRAEGEDATFQPVRSAAGVLDHARRGEPGLIVLDLDL
GRDPDGNRIDGVRLVAPLVDLGWRVVVLSGSSDAGRVGAALDAGGFVFVPKNAPFPALLN
AIREARAGRSVMPPGRREQFIKLHRDRESERRDLHEKLNKLTQREREVLALLAGGKRAQA
VADHFVVSLATVRTQIRAVLTKLEVGSQLEAVALYRKAAGL
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgaccggggcgagcccgatcctgatcgtcgacgaccacgagctggtcggttcggccctg
gcgctgaacctgcgcgccgagggtgaggacgcgacgttccagcccgtgcggtcggcggcc
ggcgtcctcgaccacgcccgccgcggcgagcccgggctgatcgtgctcgacctggacctc
ggccgggacccggacggcaaccggatcgacggggtgcgcctggtcgcgccgctggtcgac
ctcggatggcgggtcgtggtcctgtccggcagctccgacgcgggccgggtcggcgccgcg
ctcgacgccggggggttcgtcttcgtcccgaagaacgccccgttcccggctctgctcaac
gccatccgcgaggccagggcggggcggtcggtgatgccgcccggccgccgggagcagttc
atcaagctgcaccgcgaccgcgagagcgagcgccgcgacctgcacgagaagctgaacaag
ctcacgcagcgcgagcgcgaggtgctggcgctgctcgccggcgggaagcgggcccaggcc
gtcgcggaccatttcgtcgtgtcgctggcgaccgtccggacccagatccgcgccgtcctc
accaagctcgaggtcgggtcccagctcgaggccgtggcgctctaccggaaggcagcaggg
ctctga
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