Pseudonocardia sp. EC080610-09: AD006_15755
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Entry
AD006_15755 CDS
T04146
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pseq
Pseudonocardia sp. EC080610-09
Pathway
pseq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pseq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AD006_15755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pseq03400
]
AD006_15755
Enzymes [BR:
pseq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AD006_15755
DNA repair and recombination proteins [BR:
pseq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AD006_15755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
AAA_11
Viral_helicase1
AAA_22
Helicase_RecD
SH3_13
UvrD-helicase
AAA_16
PhoH
TraI_hel_assoc_N
SLFN-g3_helicase
AAA_28
nSTAND3
T2SSE
ATPase
Motif
Other DBs
NCBI-ProteinID:
ALL76399
LinkDB
All DBs
Position
complement(3279831..3281846)
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AA seq
671 aa
AA seq
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MTVPTSPATTTTAAAPERDPFGPRAARTASGVLAEFNVADVLAPGDLHVARRLTRLGGRG
DPTGVADGAAAEPVPVLLAAALAVRAIRNGSVCVDLSAAATSTASEGEIAVDVSGLPWPE
PAAWRAELAASPLVADGADAPADRPLRLLGDLLYLERYWQEEELVRREFAARSGPVTEVV
PERLCAALDRLLGRPGAERQRLAAAVAALRPVTVIAGGPGTGKTTTVARLLAVLHDLHGG
STQGRPGLRVALAAPTGKAAARLTQSVTEAAGELSEDDRKAITGTTASTLHRLLGSRGSS
GRFRHHRGNRLPHDVVVVDETSMVSLTMMARLLEAVRPDARLVLVGDPEQLASVEAGAVL
GDLAAAGGRPEPALQEALERCGAFRADRPIPAATAEPDAGPGEPGEPVVVRNGVVELQRN
WRFGGLIADFAAAVQAGDGDAAAALLSRDSGELTFVDADPAEVPAAALDPLRSEVVGSAT
GLIDAADGGDVDRALEVLDEHRVLCGHRRGPYGVARWTTEIERWISTARPGYDAEAPWYP
GRPLLVTTNDYDLGLFNGDTGVVVRTPEGRRAVFPTDGRPQEFEPARLGGVGTVYAMTVH
RSQGSQFDRITVVLPPGDSPLMTRELLYTAVTRARRHVRIIGTEAAVRAAIARPAGRASG
LRNRLGATDGA
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtccccacgagccccgccaccacgacgaccgccgccgcaccggagcgcgacccg
ttcggcccgcgggccgcgcgcaccgcgtcgggggtcctcgccgagttcaacgtcgcggac
gtcctcgcgcccggcgacctgcacgtggcccgccggctgacgcggctcggcggccgcggc
gacccgaccggtgtggccgacggcgccgccgccgaacccgtgccggtgctgctggccgct
gcgctcgcggtgcgggccatccgcaacggctcggtctgcgtggacctctcggcggccgcg
acgtcgaccgcgagcgagggggagatcgccgtcgacgtgtccggcctgccgtggccggaa
ccggcggcgtggcgcgccgagctggcggcgagccccctggtcgccgacggcgcggacgcg
cccgcggaccgtccgctgcggctgctcggcgacctgctgtacctggagcggtactggcag
gaggaggagctggtgcggcgcgagttcgccgcgcgctccgggccggtcaccgaggtcgtg
ccggagcggctgtgcgccgccctggaccggttgctcggccgtcccggtgccgagcgccag
cggctcgccgccgccgtcgccgcgctgcgcccggtcacggtgatcgccggcgggcccggc
acgggcaagacgacgacggtcgcccggctgctcgccgtcctgcacgacctgcacggcggg
agcacgcagggccgtcccggcctgcgggtcgcgctggccgcgcccaccggcaaggcggcc
gcccggctgacccagtcggtgaccgaggccgcgggtgagctgtcggaggacgatcgcaag
gcgatcacgggcacgacggcgtcgaccctgcaccggctcctgggctcgcgcgggagctcc
gggcggttccgccaccaccgcgggaaccggctgccgcacgacgtcgtcgtggtcgacgag
acctcgatggtgtcgctgacgatgatggcccggctcctggaggccgtgcggccggacgcc
cgcctggtgctggtcggcgaccccgagcagctcgcctcggtggaggcgggtgccgtgctc
ggcgacctcgccgccgcaggcggccggcccgagcccgccctgcaggaggcgttggagcgg
tgcggtgcgttccgcgccgaccgcccgatcccggcggccaccgcggagccggacgccggc
cccggggaaccgggcgagccggtcgtcgtgcgcaacggtgtggtggagttgcagcgcaac
tggcggttcggcggactgatcgcggacttcgccgccgccgtgcaggccggcgacggcgac
gccgcggcggcgctgctgagccgggactccggagagctgaccttcgtcgacgccgacccg
gccgaggtcccggcggccgcgctggacccgctgcgttccgaggtggtcggctcggcgacc
gggctgatcgacgccgccgacggcggggacgtcgaccgggcgctggaggtcctcgacgag
caccgcgtgctgtgcgggcaccggcgcgggccctacggcgtcgcccggtggaccacggag
atcgagcgctggatctccaccgcgcgccccggctacgacgccgaggccccctggtacccg
ggccggcccctgctcgtcaccaccaacgactacgacctggggttgttcaacggcgacacc
ggcgtcgtcgtccggaccccggagggccgccgtgccgtgttccccaccgacgggcggccg
caggagttcgaaccggcccggctgggcggcgtcgggaccgtctacgcgatgacggtgcac
cgcagccagggcagccagttcgaccggatcaccgtcgtgctgccgcccggggactcgcca
ctcatgacccgcgagctgctctacaccgccgtgacccgggcccggcggcacgtgcggatc
atcggcacggaggccgcggtgcgggccgcgatcgcgcgcccggcgggacgcgccagcggt
ctgaggaaccggctgggcgccacggacggcgcgtga
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