Pseudonocardia sp. EC080610-09: AD006_16865
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Entry
AD006_16865 CDS
T04146
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pseq
Pseudonocardia sp. EC080610-09
Pathway
pseq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pseq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AD006_16865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pseq03400
]
AD006_16865
Enzymes [BR:
pseq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AD006_16865
DNA repair and recombination proteins [BR:
pseq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AD006_16865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
ALL76571
LinkDB
All DBs
Position
3545604..3547721
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AA seq
705 aa
AA seq
DB search
MSSPATPRTARTGGSPARRPARNRGEWTAAAALPVARVAVDVPLPHLDRPFDYRVPSHLD
DAAVPGVRVRVRFAGRMLDGYLLERVEDSAHGGKLAWVDKVVSAEPVLTPEVAGLSRAVA
DRYAGVFADVLRLAIPARHARVESETPRERTVPEPAAPDRAGWETYPRGGALLDALAGGR
AAHAVWQPVPGEDWAARLAEAAAACRTAGRSALLVVPDQRDVDRLHAACAAQLGDDAVVA
LSADLGPAERYRRWLAVRRGSVRVVVGTRSAAFAPLGELGLLAVWDDGDDSHSEPRAPYP
QIRDVLVLRAHREGAAVLVAGFARTAEAQLLVESGWAQAVVADRATVRARAPRVTAIGES
DTQLVRDPSARAARVPGVAFEAARTALAAGRPVLVQVPRSGYLPFLACASCREAARCRHC
AGPLGLPRPGPGGARGDDGSSGLPSCRWCGRVETSFRCGNCASRRLRAGVIGAGRTAEEL
GRAFPGVPVRTSGGGVAVLDDVEAGPALVVATPGAEPVAEGGYGAALLLDGWAMLARPDL
RVAEETLRRWFAAAAGVVPHGDGGRVVVVADSSIPTVQALVRWDPAWHAEGELAERAEVG
FPPAVRMAAVEGPPAAVAEICDAVLDPDRDPPEGVELLGPVEIDPVERPGGTGPDRDDVR
ERGLLRVPRRSGRRLAAALHDAQASRTARKAPETVRVRLDPDEID
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
gtgagttctcccgcgacgccccgcaccgcccgcacgggtgggtcgccggcccggcgcccc
gcgaggaaccgcggcgagtggacggcggctgccgcgctgccggttgcgcgggtcgccgtc
gacgtcccgctgccgcacctggaccgccccttcgactaccgggtcccgtcgcacctcgac
gacgccgcggtgcccggcgtgcgggtgcgtgtgcgtttcgcgggccggatgctcgacggg
tacctgctggaacgggtcgaggactccgcgcacggcgggaagctcgcctgggtggacaag
gtggtgtccgccgagccggtgctgacaccggaggtggccggtctgtcccgcgccgtcgcc
gaccgctacgcgggggtgttcgccgacgtcctgcggctcgcgatccccgcccggcacgcg
cgcgtggagtcggagacgccgcgggagcggaccgtgcccgagcccgccgcgcccgatcgg
gccggctgggagacctacccccgcggcggagccctgctcgacgcgctggccggcggccgg
gccgcgcacgccgtctggcagccggtgcccggtgaggactgggcggcccggctcgccgag
gccgccgcggcgtgccgcacggccggccgctcggcactgctggtggtgcccgaccagcgc
gacgtcgaccggctgcacgccgcctgcgcggcgcagctcggtgacgacgccgtcgtcgcg
ctctcggcggacctcggcccggccgagcgctaccgccggtggctggcggtgcgccggggg
agcgtccgggtggtcgtcgggacgcggtcggcggcgttcgccccgctcggtgagctcggc
ctgctggcggtctgggacgacggcgacgactcccactccgagccccgcgcgccgtacccg
cagatccgggacgtgctcgtgctgcgcgcccaccgggagggcgcggcggtgctggtcgcc
gggttcgcccgcaccgcggaggcgcagctgctcgtcgagtccgggtgggcacaggccgtc
gtcgccgaccgggccaccgtccgtgcccgggcgccgcgggtcaccgcgatcggcgagtcc
gacacccagctcgtgcgcgacccgtcggcccgggcggcgcgggtcccgggggtggcgttc
gaggccgcccggaccgcgctggccgccgggcgcccggtgctggtccaggtgccgcgctcg
ggctacctgccgttcctggcctgcgcgtcctgccgggaggcggcacggtgccggcactgc
gcggggccgctgggactcccgcggcccggcccgggcggagcccgtggcgacgacggctcg
tccgggctgccgtcctgtcgctggtgcgggcgggtggagacctccttccggtgcggcaac
tgcgcgtcccggcggctgcgggccggggtgatcggcgcgggccggaccgccgaggagctg
ggccgtgccttcccgggtgtgcccgtgcggacgtccggtggtggcgtggcggtgctcgac
gacgtcgaggccggccccgcgctcgtcgtcgcgacgcccggcgcggagccggtcgccgag
ggcggctacggcgccgcgctgctgctggacgggtgggcgatgctcgcccgcccggacctg
cgggtcgcggaggagaccctgcgccgctggttcgccgcggccgccggggtcgtcccgcac
ggcgacggcggccgggtcgtggtcgtcgccgactcgtcgatcccgaccgtgcaggcactc
gtccggtgggacccggcctggcacgccgagggcgagctggccgagcgtgccgaggtcggg
ttcccgcccgcggtgcggatggcggcggtcgagggaccgcccgccgcggtcgcggagatc
tgcgacgccgtcctcgacccggaccgggacccgccggagggggtggagctgctcgggccg
gtggagatcgacccggtggagcggcccggggggaccggcccggaccgcgacgacgtccgg
gaacgggggctgcttcgggttccgcggcggtcggggcgccggctcgccgccgccctgcac
gacgcccaggcgtcgcggaccgcgcggaaggcaccggagaccgtgcgggtccgcctggac
ccggacgagatcgactga
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