Pseudonocardia sp. EC080610-09: AD006_20230
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Entry
AD006_20230 CDS
T04146
Name
(GenBank) ABC transporter ATPase
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
pseq
Pseudonocardia sp. EC080610-09
Pathway
pseq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pseq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AD006_20230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pseq02000
]
AD006_20230
Transporters [BR:
pseq02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
AD006_20230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
AAA_16
AAA_29
SMC_N
AAA_25
T2SSE
Rad17
RsgA_GTPase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ALL77049
LinkDB
All DBs
Position
4385231..4387006
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AA seq
591 aa
AA seq
DB search
MSVVSRPAPASPPVDPRLVRTASAVRVHLLVAAVCGVAATGLILAQAWLVSRVVAGATPA
FTGDGSPLGPGSGLDVLWPLVVGVAGVPLARALLSYGAESAALRSAARAKSQLRMQLVRR
LAAAPPDPSRSTGQVVTLATRGLDALDDYFARYLPQLVLAVLVPVAVLVVVGGADWISAV
VIGVTLPLIPVFMALVGMHTRARTDRQWRLLSRLGGHFLDVVQGLPTLALFRRATVVAEK
VRETTDQHRTATMGTLRVAFLSAFVLELLATLAVALVAVEVGLRLLYGDLDYATALFVLI
LAPEAYLPLREVGARFHASLEGVAAARQVFDELDRPSTGPAGGTLPPPAPAPAGRALAVD
ALHVRYPGAPADALTGLSLELRPGESVLLSGPSGSGKSTLLGVLLGFVAPTGGTVRVPGP
GCADRELADLDLDAWRRTVAWVPQQPHLFAGSVADNVRLGEPGASDTAVREAGRRSGLDA
VVAGLPQGWDTPLGEGGARLSSGERQRVALARAFLRDAPLVLLDEPTAHLDPDSAEAVRS
AAADLLRGRTAAVVAHDAGWAEHTDRTVHLERGRITGPVPAHGPERDEARR
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcgtgtcccggcccgctcccgcctccccgccggtcgatccccggctcgtccgg
accgcgagcgccgtccgggtgcacctgctggtcgcggccgtctgcggggtcgcggcgacc
ggcctgatcctggcgcaggcctggctggtgtcccgggtcgtcgccggggcgaccccggcc
ttcaccggcgacgggtcaccgctgggcccgggctccgggctcgacgtgctgtggccgctc
gtcgtgggggtcgccggcgtgccgctggcccgcgccctgctgtcctacggggcggagtcc
gcggcgctgcgcagcgccgcacgcgccaagtcgcagctgcggatgcagctggtccggagg
ctcgccgcggccccgccggacccgtcgcggtccaccgggcaggtcgtcacactcgccacc
cgcggcctcgacgcactcgacgactacttcgcccgctacctgccccagctcgtcctcgcg
gtgctggtcccggtggccgtgctggtcgtcgtcggcggcgcggactggatctccgcggtc
gtcatcggcgtgacgctgccgctgatcccggtcttcatggcgctggtcgggatgcacacc
cgcgcgcgcaccgaccggcagtggcggctgctgtcgcggctcggcgggcacttcctcgac
gtcgtgcagggcctcccgacgctggcgctgttccggcgggcgaccgtcgtcgccgagaag
gtccgcgagaccaccgaccagcaccgcaccgccaccatggggacgctgcgggtggcgttc
ctgtccgcgttcgtgctggagctgctcgcgaccctcgccgtggcgctcgtcgccgtcgag
gtcgggctgcggctgctctacggcgacctcgactacgcgacggcgctgttcgtgctgatc
ctcgcgccggaggcgtacctgccgctgcgcgaggtcggcgcccggttccacgcgagcttg
gagggcgtcgccgccgcccggcaggtgttcgacgagctcgaccgcccctccaccggcccg
gcaggcgggaccctccccccaccggcgcccgcccccgccgggcgcgcgctggccgtcgac
gcgctccacgtccggtacccgggcgcccccgccgacgcactgaccggtctctcactggag
ctgcgccccggggagtcggtgctgctcagcggaccgtccgggtcggggaagtcgaccctg
ctgggggtgctgctcggcttcgtggcccccacgggcggcacggtgcgcgtgcccggcccg
ggttgcgccgaccgggagctcgccgacctggatctcgacgcgtggcggcgcactgtcgcc
tgggtgccccagcaaccgcacctgttcgccgggtcggtcgccgacaacgtgcggctcggc
gagcccggtgcgtccgacaccgcggtacgcgaggcgggccgccggtccggtctcgacgcc
gtcgtcgcgggcctgccgcagggctgggacaccccgctcggcgagggcggcgcgcggctg
tcgtccggggaacggcagcgggtcgcgctggccagggcgttcctgcgggacgccccgctg
gtcctgctcgacgagcccaccgcgcacctcgacccggactcggccgaggccgtccgctcc
gcggccgcggacctgctccgcggccggacggcggccgtcgtcgcgcacgacgccggctgg
gccgagcacaccgaccgcaccgtgcacctggagcggggccggatcaccgggcccgtcccg
gcccacggccccgagcgggacgaggcccgccgatga
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