KEGG   Pseudonocardia sp. EC080610-09: AD006_21365
Entry
AD006_21365       CDS       T04146                                 
Name
(GenBank) pseudouridine synthase
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
pseq  Pseudonocardia sp. EC080610-09
Brite
KEGG Orthology (KO) [BR:pseq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pseq03009]
    AD006_21365
Enzymes [BR:pseq01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     AD006_21365
Ribosome biogenesis [BR:pseq03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    AD006_21365
SSDB
Motif
Pfam: PseudoU_synth_2 S4 SYY_C-terminal S4_2 DUF8746
Other DBs
NCBI-ProteinID: ALL77223
LinkDB
Position
complement(4637333..4638094)
AA seq 253 aa
MSTAHDPDGVRLQKVLARAGVASRRAAEELIAQGRVQVDGETVREMGRRIDPETAVLHVD
GARVTLRDDQVYLALNKPVGLHSTMSDDLGRPCVGDLLADRVELMNSAQRLFHVGRLDAD
TEGLLLLTNDGELGHRLMHPSYEVPKTYLAEVEGKIARDLGRRLRDGIELEDGIARVDAF
KLVDAVPGRSTVQLILHEGRKHIVRRMLSEVGHPVQRLVRTAVGEVRLGNQKPGKLRPLD
RVEVGSLYKAVGL
NT seq 762 nt   +upstreamnt  +downstreamnt
atgagtaccgcacacgaccccgacggcgtacggctgcagaaggtgctggcccgcgcgggt
gtcgcgtcccggcgcgccgccgaggagctgatcgcccagggccgcgtccaggtcgacggc
gagaccgtccgcgagatgggccgccggatcgacccggagaccgccgtcctgcacgtcgac
ggcgcccgggtcaccctgcgcgacgaccaggtctatctggcgctgaacaagccggtcgga
ctgcactcgacgatgtccgacgacctcggccgcccgtgcgtcggtgacctgctcgccgac
cgggtcgagctgatgaactccgcgcagcggctgttccacgtcggccgcctggacgccgac
accgagggcctgctcctgctcaccaacgacggcgagctcggccaccggctgatgcacccg
tcgtacgaggtgcccaagacctacctggccgaggtcgaggggaagatcgcccgcgacctg
ggccggcggctgcgggacgggatcgagctggaggacggcatcgcccgcgtcgacgccttc
aagctcgtcgacgccgtgcccggccgctccaccgtgcagctgatcctgcacgaggggcgc
aagcacatcgtgcggcggatgctgtccgaggtcgggcacccggtgcagcgactggtgcgc
accgccgtcggcgaggtccggctcggcaaccagaagcccggcaagctccgtccgctggac
cgggtcgaggtcgggtcgctgtacaaggctgtggggctgtag

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