Pseudonocardia sp. EC080610-09: AD006_22405
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Entry
AD006_22405 CDS
T04146
Name
(GenBank) preprotein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
pseq
Pseudonocardia sp. EC080610-09
Pathway
pseq02024
Quorum sensing
pseq03060
Protein export
pseq03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pseq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
AD006_22405
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AD006_22405
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AD006_22405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pseq02044
]
AD006_22405
Secretion system [BR:
pseq02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
AD006_22405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
Sterol-sensing
Motif
Other DBs
NCBI-ProteinID:
ALL79013
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All DBs
Position
4871212..4873482
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AA seq
756 aa
AA seq
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MIALAVLAVSAVVALTTAPTLGLDLRGGTQIVLETRDTEEVPADAAATDRVLEVLRGRVD
GLGVAEPSLTRSGENRIIVELPGLTDPAEAAETLGRTAQLTMHPVLGTGAPEAAPTADET
GQPLQLGPPALQGDMIASAQSVPSQQSVGFEVQVGFDGEGPGRWQALTGQAACAPPGDPQ
RRVAIVLDDQVISSPQVDPSIACQVGMVGGQTTITGNFSQEQANELSVLIEGGALPVPVE
IIEQRTVGPTLGADAISASAWAAIIGSALTAVFLIVVYRLVGVVAVVALGGYALTAYAVQ
TGLGATLTLPGLAAFVLAVGMAVDANVLIAERSREEYAARPRLERASENGYRFSLSAVGD
AAVTSLLAAVLLFGLASGPVRGFGVTLVIGVVVSLFSALVLSRLLTLAVLRIPAVRRRPR
ITGIAAIGPVRQRLEARDPGFLRNAAKVLAVAGVVLVVAVSGLFVRGLELGVEFTGGRLV
EFTTTNPITPEQAREAVTAAGYPNLQVTTTGDGAVGLRAGELADAEVAALRDSVAAAGGG
AEVLRDEMIGPSLGEELARGGLIALGVALAAQFLYLAFRFRWTLGAGAVAALLANVLVVV
GVFAWTGRTLDGVFLAALLTVIGYSVNDTVVVFDRVREHWARRAKDPFHRVVGSAVLSTL
PRTVNTGVSTLMILVMLLLLGGATLADFALALIIGIVVGTISTIVVAGPVAILLERRWGG
TPPRVGKDKQPVGKAGRRNPSRADRARSRNADGAVV
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgctcgccgtgctcgccgtgtccgccgtcgtcgcgctcaccaccgcgcccacc
ctgggcctggacctgcgcggcggcacccagatcgtgctcgagacccgcgacaccgaggag
gtgcccgcggacgccgcggccaccgaccgggtgctcgaggtcctccgcggccgcgtcgac
ggtctcggtgtcgccgaaccgtcgctgacgcgctccggggagaaccggatcatcgtcgag
ctccccggtctcaccgacccggcggaggccgccgagacgctcggccggaccgcccagctg
accatgcacccggtgctcggcaccggggccccggaggccgcgcccaccgccgacgagacg
ggccagccgctgcagctcgggccgcccgcgctgcagggcgacatgatcgcctcggcgcag
tcggtgccgtcgcagcagtcggtcgggttcgaggtgcaggtcggcttcgacggcgagggc
cccggccgctggcaggcgctcaccgggcaggccgcctgcgccccgccgggcgacccccag
cgccgggtcgcgatcgtgctcgacgaccaggtgatctcctcgccgcaggtcgacccctcg
atcgcctgccaggtcggcatggtcggcgggcagacgacgatcaccggcaacttctcccag
gagcaggcgaacgagctgtccgtgctcatcgagggcggcgcgctgccggtgccggtcgag
atcatcgagcagcggaccgtcggcccgacgctcggcgccgacgcgatctccgcgagcgcc
tgggccgcgatcatcggctcggcgctcaccgccgtcttcctgatcgtcgtctaccgcctg
gtcggggtggtcgccgtcgtcgcgctcggcggctacgcgctcaccgcctacgcggtgcag
accggactcggcgcgaccctgaccctgcccggcctggccgccttcgtcctcgccgtcggt
atggccgtcgacgcgaacgtgctgatcgccgaacgctcccgcgaggagtacgcggcccgg
ccacgcctggaacgcgcgtcggagaacggctaccggttctcgctgtccgccgtcggggac
gccgccgtcacctcgctgctcgccgccgtcctgctgttcgggctggcgtcgggcccggtg
cgcggcttcggcgtcacgctcgtcatcggtgtcgtcgtctcgctgttctcggcgctggtg
ctgtcccggttgctgacgctggcggtgctgcggatccccgcggtccgcaggcggccccgc
atcaccgggatcgcggcgatcgggcccgtgcggcagcgcctggaggcgcgcgacccgggc
ttcctgcgcaacgcggcgaaggtgctcgccgtcgccggtgtggtgctggtggtcgcggtc
agcgggctgttcgtgcgcgggctggaactcggggtcgagttcaccggcggccggctcgtc
gagttcacgacgacgaacccgatcacccccgagcaggcccgggaggccgtcaccgccgcc
gggtacccgaacctgcaggtcacgacgaccggggacggcgccgtcggtctgcgggccggt
gaactggcggacgcggaggtcgcggccctgcgcgactcggtcgccgccgccggtggcggg
gccgaggtcctgcgcgacgagatgatcggcccgagcctcggcgaggagctggcgcggggc
ggtctgatcgccctcggcgtcgcgctggcggcccagttcctctacctggccttccggttc
cggtggacactcggcgccggtgcggtggccgccctgctcgccaacgtgctggtcgtcgtc
ggagtgttcgcctggaccggtcggaccctcgacggggtgttcctcgcggcgctgctcacc
gtcatcggctactccgtcaacgacacggtggtggtgttcgaccgggtgcgcgagcactgg
gcgcgccgggcgaaggacccgttccacagggtcgtcggatcggccgtgctctcgacgctg
ccgcggacggtgaacaccggcgtctcgacactgatgatcctggtgatgctgctgctcctg
ggcggggcgacgctcgccgacttcgcgctggcgctgatcatcggcatcgtggtgggcacg
atctcgaccatcgtggtcgccggaccggtcgcgatcctgctggagcgccgctggggcggg
acaccgccgcgggtcggcaaggacaagcagccggtcggcaaggccggtcgccgcaacccg
tcgcgggccgaccgcgcccggagccgcaacgccgacggcgccgtggtctga
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