Pseudonocardia sp. EC080610-09: AD006_25835
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Entry
AD006_25835 CDS
T04146
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pseq
Pseudonocardia sp. EC080610-09
Brite
KEGG Orthology (KO) [BR:
pseq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pseq03016
]
AD006_25835 (truB)
Enzymes [BR:
pseq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AD006_25835 (truB)
Transfer RNA biogenesis [BR:
pseq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AD006_25835 (truB)
Prokaryotic type
AD006_25835 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
NAD_binding_3
LPP
Motif
Other DBs
NCBI-ProteinID:
ALL77876
LinkDB
All DBs
Position
complement(5612720..5613613)
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AA seq
297 aa
AA seq
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MPKPPPPPPGLVVVDKDRGPTSHDVVGKLRRIMGTRKVGHAGTLDPMATGVLVVGIERAT
KLLGHLSLDTKAYTATVRLGQATDTDDAEGTPVGDPVTVTAGEPEVRGAMAALTGDIEQV
PSAVSAVKIDGKRAYQRVRDGETVEIPARPVTVSAFDLRDLRRDGGFVDLDVVVECTSGT
YVRALARDLGVALGAGGHLTALRRTRVGPFTLEHARTVEQLAAEPGLSLDLAAAVATAFP
RVDVDDAAATDVRIGRSLPSAGIPGTYGVFGPDGAALALMADRGPSARPVVVLAPAG
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaagccaccgcctccgccgcccggtctcgtcgtcgtcgacaaggaccggggtccg
accagccacgacgtcgtcgggaagctgcgccggatcatgggcacccgcaaggtcggccac
gccgggacgctcgacccgatggcgaccggcgtgctggtcgtcggcatcgagcgggcgacg
aagctgctggggcacctgtcgctggacaccaaggcctacaccgcgaccgtccggctcggg
caggcgaccgacaccgacgacgccgagggcacgcccgtcggtgaccccgtcacggtcacg
gcgggcgagccggaggtccggggcgcgatggcggcgctgaccggggacatcgagcaggtc
ccgagcgcggtgtccgcggtgaagatcgacgggaagcgcgcctaccagcgcgtccgcgac
ggcgagacggtcgagatcccggcccggccggtcacggtgtcggcgttcgacctgcgcgac
ctgcgccgggacggcgggttcgtggacctcgacgtcgtcgtggagtgcacgtcggggacc
tacgtgcgggcgctggcccgcgatctcggggtggcgctcggcgcgggcgggcacctcacg
gcgctgcgccgcacccgggtcgggcccttcaccctggagcacgcccgcaccgtcgagcag
ctggccgccgagccgggcctctcgctcgacctggccgcggcggtggcgacggcgttcccg
cgggtcgacgtcgacgacgcggccgccaccgacgtgcggatcggccggtcgctgccgtcc
gcggggatccccggcacgtacggcgtgttcgggcccgacggggccgcgctcgcgctgatg
gccgaccgcggaccgtccgcgcgcccggtggtcgtgctggccccggccggctga
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