Pseudonocardia sp. EC080610-09: AD006_26075
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Entry
AD006_26075 CDS
T04146
Name
(GenBank) DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
pseq
Pseudonocardia sp. EC080610-09
Pathway
pseq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pseq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AD006_26075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pseq03400
]
AD006_26075
Enzymes [BR:
pseq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
AD006_26075
DNA repair and recombination proteins [BR:
pseq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AD006_26075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ALL79151
LinkDB
All DBs
Position
complement(5663760..5664311)
Genome browser
AA seq
183 aa
AA seq
DB search
MPSRDELDRARDRMIPDVLPGPGDPPLRVLFCGINPGLVSAATGHHFARPGNRFWPVLHG
SGFTPRLLTPAEQGELAGLGLGITNMAPRATARADELTDDELVAGGEHLRTLVGARAPRW
LAVVGIGAYRTAFGRRDAAVGEQDDRLGATRVWVLPNPSGLNAHWSRAGMVAEFARLRAV
SGG
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
ctgccgagccgcgacgagctcgaccgtgcccgggaccggatgatcccggacgtgctcccc
ggccccggtgacccgccgctgcgggtgctgttctgcgggatcaacccgggcctggtctcc
gcggcgaccgggcaccacttcgcccgcccggggaaccggttctggccggtgctgcacggg
tccgggttcacgccgcggctgctgacgcccgccgagcagggcgagctggccgggctcggg
ctgggcatcaccaacatggcgccgcgcgcgaccgcgcgggccgacgagctgaccgacgac
gagctggtcgccggtggcgagcacctgcgcaccctggtcggcgcccgcgcgccgcgctgg
ctcgcggtcgtcgggatcggcgcctaccggaccgcgttcggccggcgcgacgccgcggtg
ggggagcaggacgaccgcctcggcgccacgcgggtctgggtgctgccgaacccgtccggg
ctcaacgcgcactggtcgcgggccgggatggtcgccgagttcgcccggctccgcgccgtg
tcgggcggctga
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