Pseudonocardia sp. EC080610-09: AD006_26920
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Entry
AD006_26920 CDS
T04146
Name
(GenBank) ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pseq
Pseudonocardia sp. EC080610-09
Brite
KEGG Orthology (KO) [BR:
pseq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pseq03400
]
AD006_26920
DNA repair and recombination proteins [BR:
pseq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
AD006_26920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
ResIII
TrwB_AAD_bind
FtsK_SpoIIIE
CbiA
AAA_30
AAA
AAA_16
T2SSE
AAA_6
Zeta_toxin
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ALL78034
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Position
complement(5853880..5855475)
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AA seq
531 aa
AA seq
DB search
MADNADSAADHTAARTIAEGYATDGAALELGTVLVDGVCDPEARVRIPLATLNRHGLVAG
ATGTGKTKTLQALAGQLSDAGVPVLLADVKGDLSGMARAGEPGAKIDERVRDTGDDWTPT
AYPVQFLSLGDGGVAVPVRATITQFGPILLAKVLGLNPTQESTLGLIFHWADQRGLPLLD
TKDLRAVIQHLTSDEGKADLKGIGGVSSSTAGVILRALVNLEAQGGDTFFGEPEFEPADL
MREIEGKGVVTLLELAERAANPMLFSTFLMWLLAELYEDLPEAGDLDKPKLVFFFDEAHL
LFADASKAFLDRIEQTVKLIRSKGVGVFFCTQLPTDVPNEVLSQLGARVQHALRAFTPED
QKALNRTVKTYPRSDVYDLESALTSLGTGEAIVTVLSERGAPTPVAWTRLRAPRSMMAAL
GEDDVRQEAAASSLQAKYGEMVDRDSAYERLTGRIASGPGGDATPVEAPAPQAPPPGEAA
PPPPPPQPQDSSEQGWFSKVGDFLQSPTGRQITNTVTREITRSLFGTRRRR
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
gtggccgacaacgcagattccgctgcagatcacaccgccgcccgcaccatcgccgagggg
tacgccaccgacggcgccgcgctggaactcggcacggtgctcgtcgacggtgtctgcgac
ccggaggcgcgggtccggatcccgctggcgacgctgaaccggcacggcctcgtcgccggc
gccaccggtaccggcaagacgaagacgctgcaggcgctcgccgggcagctctccgacgcc
ggcgtcccggtgctgctggccgacgtcaagggcgacctgtcgggcatggcgcgggccggc
gagccgggcgcgaagatcgacgagcgggtgcgcgacaccggcgacgactggacgccgacg
gcctacccggtgcagttcctgtcgctgggcgacggcggcgtcgccgtcccggtgcgggcg
acgatcacccagttcggcccgatcctgctggcgaaggtcctggggctcaaccccacccag
gagtcgaccctcgggctgatcttccactgggccgaccagcgcgggctgccgctgctcgac
acgaaggacctgcgcgccgtcatccagcacctgacctccgacgagggcaaggccgacctc
aaggggatcggcggggtgtcgtcgtcgacggcaggggtgatcctgcgggcgctggtgaac
ctggaggcccagggcggggacacgttcttcggcgagcccgagttcgagccggcggacctg
atgcgcgagatcgaggggaagggtgtcgtcaccctgctcgagctcgccgagcgggccgcg
aacccgatgctgttctcgacgttcctcatgtggctgctggccgagctctacgaggacctg
cccgaggccggcgacctggacaagccgaagctggtcttcttcttcgacgaggcgcacctg
ctgttcgccgacgcgtcgaaggcgttcctcgaccgcatcgagcagaccgtgaagctcatc
cggtccaagggtgtcggggtgttcttctgcacccagctgcccaccgacgtcccgaacgag
gtgctgtcgcagctcggcgcgcgcgtccagcacgcgctgcgggccttcacccccgaggac
cagaaggccctcaaccggaccgtcaagacctacccccggtccgacgtctacgacctggag
tcggcgctgacgtcgctgggcaccggcgaggcgatcgtgaccgtgctgtccgagcggggc
gcccccaccccggtggcgtggacccggctgcgggcgccgcgctcgatgatggccgcgctc
ggcgaggacgacgtccggcaggaggcggccgcgtcgtcgttgcaggccaagtacggcgag
atggtcgaccgcgactccgcctacgagcggctgaccggccggatcgcgtccggtcccggc
ggggacgccacccccgtcgaggccccggccccgcaggccccgccgcccggcgaggccgcc
ccgccgccgcccccgccgcagccgcaggactccagcgagcagggctggttctccaaggtc
ggtgacttcctgcagtccccgaccgggcggcagatcacgaacacggtcacccgggagatc
acccggagcctgttcgggacccgccgccggcgctga
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