Pseudonocardia sp. EC080610-09: AD006_27730
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Entry
AD006_27730 CDS
T04146
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pseq
Pseudonocardia sp. EC080610-09
Pathway
pseq00260
Glycine, serine and threonine metabolism
pseq00460
Cyanoamino acid metabolism
pseq00630
Glyoxylate and dicarboxylate metabolism
pseq00670
One carbon pool by folate
pseq00680
Methane metabolism
pseq01100
Metabolic pathways
pseq01110
Biosynthesis of secondary metabolites
pseq01120
Microbial metabolism in diverse environments
pseq01200
Carbon metabolism
pseq01230
Biosynthesis of amino acids
pseq01240
Biosynthesis of cofactors
pseq04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pseq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AD006_27730
09102 Energy metabolism
00680 Methane metabolism
AD006_27730
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AD006_27730
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AD006_27730
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AD006_27730
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AD006_27730
Enzymes [BR:
pseq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AD006_27730
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
SelA
Motif
Other DBs
NCBI-ProteinID:
ALL79210
LinkDB
All DBs
Position
complement(6028665..6029945)
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AA seq
426 aa
AA seq
DB search
MGTGPGASTGPLDGSLQHTDPEVHAAVAAELGRQRRTLEMIASENFAPQAVMEAQGSVLT
NKYAEGYPGRRYYGGCEHVDVIEQLAIDRLTELFGAGFANVQPHSGAQANAAAMAALLDP
GDTILGLDLAHGGHLTHGMRLNFSGRLYDVAAYHVRPDDHRVDMDEVERLAHERRPKLIV
AGWSAYPRHLDFAAFRRIADAVGAYLMVDMAHFAGLVAAGLHPSPVPYADVVTSTTHKTL
GGPRGGVILARAELAKKLNSTVFPGQQGGPLEHVIAAKAVAFRLAGTPAFAERQQRTLDG
AQLIASRLLDESGVGVVSGGTDVHLVLVDLRESELDGKQAEDRLHRVGITVNRNAVPFDP
RPPMVSSGLRIGTPALAARGFGAGEFAEVADVIARTLRPGVTGSELDVLSGRVTALADRH
PLYPEL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atcgggaccgggccgggtgcgtccaccggcccgctggacgggtcgctgcagcacaccgac
cccgaggtgcacgccgccgtcgccgccgagctcggccgccagcggcggaccctggagatg
atcgccagcgagaacttcgcgccgcaggcggtcatggaggcgcaggggtcggtcctgacc
aacaagtacgccgagggctacccgggccggcgctactacggcggctgcgagcacgtcgac
gtgatcgagcagctggcgatcgaccggttgacggagctcttcggggccgggttcgcgaac
gtccagccgcactccggggcgcaggccaacgccgcagcgatggccgcgctgctcgacccg
ggcgacacgatcctcggcctggacctcgcccacggcgggcacctcacacacgggatgcgg
ctgaacttctcgggccggctctacgacgtcgcggcgtaccacgtccgccccgacgaccac
cgggtcgacatggacgaggtcgagcgcctggcccacgagcgacggccgaagctgatcgtc
gccgggtggtcggcgtacccgcggcacctcgacttcgccgcgttccggcggatcgccgac
gccgtcggcgcgtacctgatggtcgacatggcgcacttcgccgggctcgtcgccgccggg
ctgcacccgtcgccggtgccgtacgccgacgtcgtcaccagcaccacccacaagaccctc
ggcggcccgcgcgggggcgtgatcctcgccagggcggagctcgcgaagaagctgaactcg
acggtcttcccggggcagcagggcggcccgctggagcacgtgatcgccgccaaggccgtg
gcgttccggctcgccgggacgcccgcgttcgccgagcgccagcagcgcacgctcgacggc
gcgcagctcatcgcgtcccggttgctcgacgagtccggcgtcggcgtcgtctccgggggt
accgacgtgcacctcgtcctggtcgacctgcgcgagtccgaactcgacggcaagcaggcc
gaggaccggctgcaccgggtcgggatcaccgtcaaccgcaacgccgtcccgttcgacccc
cggccgccgatggtcagctcgggcctccggatcggcacccccgccctcgccgcccgtggc
ttcggcgccggcgagttcgccgaggtcgccgacgtcatcgcccgcacgctgcgcccgggc
gtcaccgggtccgagctggacgtcctgtccggccgcgtcaccgcactcgccgaccgccac
cccctctacccggagctctga
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