Pseudanabaena sp. ABRG5-3: ABRG53_0190
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Entry
ABRG53_0190 CDS
T05820
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pser
Pseudanabaena sp. ABRG5-3
Pathway
pser00061
Fatty acid biosynthesis
pser00071
Fatty acid degradation
pser01100
Metabolic pathways
pser01212
Fatty acid metabolism
pser02024
Quorum sensing
pser04146
Peroxisome
Module
pser_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pser00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ABRG53_0190
00071 Fatty acid degradation
ABRG53_0190
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ABRG53_0190
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABRG53_0190
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pser01004
]
ABRG53_0190
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pser04147
]
ABRG53_0190
Enzymes [BR:
pser01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ABRG53_0190
Lipid biosynthesis proteins [BR:
pser01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ABRG53_0190
Exosome [BR:
pser04147
]
Exosomal proteins
Exosomal proteins of breast milk
ABRG53_0190
Exosomal proteins of breast cancer cells
ABRG53_0190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
BBC22447
UniProt:
A0A2Z5WT77
LinkDB
All DBs
Position
complement(218611..220497)
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AA seq
628 aa
AA seq
DB search
MPNSSQPLQVAQLNSLWQIWEQGAKVHPDAIALHDPHAKPPVRISYKDTFEQINAFGAGL
RSLGVNFGDKVALIADNSPRWLIADQGILAIGAANATRSSQAERSELLYIIEHSDSVAIV
VENLATLKKLEPELHSLPVKQIILLSDEAAPEGAYNFQQLLDKGNSKDLGNPPIKRDTLA
TLIYTSGTTARPKGVMLTHGNFLYEVEGAQSVLQLQVNEKVLSILPTWHSYERTFEYFIF
SQGCTQIYTNLRTIKKDLKEHKPHYMVAVPRLWESIYEGVQKNFRDQPESKQRLVKFFLK
TSQKYIIAKRVVQGLNLENLYPSLGDKFKASLVVLGLWAVHKLGHKLVYQKVREATGGNF
KYIVSGGGSIAEHLEDFYEIVGIEILGGYGLTETSPITHVRRPHRNIRGGDGQPLSQTET
RIVDLSTRADVPVGQQGLVLIRGPQVMQGYYKNSEATAKAIDPQGWFDTGDLGYVSKWDD
LVITGRAKDTIVLTNGENIEPQPIEDACIRSPYIDQVVLVGQDQKQLGVLIVPNLSALEA
AGLIPPDSTLASILPELNQPKIRNLYREELNREVQNRPGYSINDRIGVFEFLPEPFTIEN
GFLTQTFKIRRNIVFERYQDIIVKMFTS
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgcctaattcttctcaaccgttgcaagtagctcaattaaatagtctttggcaaatatgg
gagcaaggagcaaaagtacatcctgatgcgatcgctctccacgatccccatgccaagcca
cctgtacgaatttcctataaagatacctttgagcaaattaatgcgttcggggcaggtttg
cgatcactaggggtaaactttggcgacaaggtggcgctgatcgccgataactcaccaagg
tggttaattgccgatcaggggattttagcgattggggccgccaatgctacccgcagttcg
caagccgagcgcagtgaattgctttacatcatcgagcatagtgatagtgtggcgatcgtg
gtggaaaatctggctactctcaaaaaactagagccagagctgcatagcttacctgttaaa
caaattattttattgtctgacgaagctgcacctgaaggtgcttataactttcagcaattg
ctagacaaaggtaatagcaaggatttaggcaatccccccattaaacgcgatactttagca
acgctaatctatacgtcaggtacaactgccagaccgaagggagtcatgctcacccacggc
aattttctctacgaagtggaaggcgctcagtcagttttacaactacaagttaacgaaaaa
gttctcagtattctgccaacatggcattcctacgagcgcacctttgaatatttcatcttt
tcccaaggttgcactcagatttacaccaatctccgcaccattaaaaaggatttaaaggag
cataagccccattacatggttgctgtgccgcgtctgtgggaatcaatctatgaaggtgtc
cagaaaaacttccgcgatcagcctgagagcaaacagcgcttagtcaaatttttcctcaaa
accagccagaaatatatcattgccaaacgggttgtccaaggcttaaatcttgaaaatctc
tatccttctctaggtgacaaatttaaagcatcgctggtagttttgggactatgggcagtt
cacaaacttggtcataaattggtttatcaaaaagtccgtgaagcaacgggcggcaacttc
aaatacatcgtgagtggtggcggctcgatcgctgaacacctcgaagacttctatgaaatt
gtcggcatcgaaattttggggggatatggtttgaccgaaacctcaccaattacccatgta
cgtcgtccacaccgcaatattcgtggtggtgatgggcagcctctgtcgcaaactgaaacc
cgcattgttgatctatcaactcgcgccgatgtgccagttggtcagcagggcttagtcctc
attcgcggcccacaggtaatgcagggttattacaaaaattctgaagcgacagctaaggcg
atcgatccacagggttggtttgatacaggcgatttgggctatgtcagcaagtgggatgac
ttagtaatcacaggtcgtgccaaagatacgatcgtcttaaccaatggcgagaatattgaa
cctcaacccattgaagatgcctgtattcgcagtccttacattgaccaagtggtattagtg
gggcaagaccagaaacaattgggtgttttaatcgttcctaacctttcagcactggaagct
gcggggttaatcccccccgattcaacattggcaagcattttgccagagttgaatcagcct
aaaattcgcaatctatatcgggaagaattgaaccgtgaagtgcaaaaccgccccggatat
agcattaatgatcgcattggtgtatttgagttcttacctgaaccctttacaatcgaaaat
gggttcctcacgcagacattcaaaatccgacgtaacatcgtatttgagcgttatcaagat
attattgtcaaaatgtttacttcatga
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