Pseudanabaena sp. ABRG5-3: ABRG53_1278
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Entry
ABRG53_1278 CDS
T05820
Symbol
hup
Name
(GenBank) DNA binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
pser
Pseudanabaena sp. ABRG5-3
Brite
KEGG Orthology (KO) [BR:
pser00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pser03032
]
ABRG53_1278 (hup)
03036 Chromosome and associated proteins [BR:
pser03036
]
ABRG53_1278 (hup)
03400 DNA repair and recombination proteins [BR:
pser03400
]
ABRG53_1278 (hup)
DNA replication proteins [BR:
pser03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ABRG53_1278 (hup)
Chromosome and associated proteins [BR:
pser03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ABRG53_1278 (hup)
DNA repair and recombination proteins [BR:
pser03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ABRG53_1278 (hup)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HU-HIG
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
BBC23535
UniProt:
A0A2Z5WWB3
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All DBs
Position
1402486..1402803
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AA seq
105 aa
AA seq
DB search
MADINRQDIIRGMMAEVDGLSYSMASASLEAVITCLTQALANHQSIMLSDFGKFGVRHRR
ARSGSHPRTHQPITIPEVTVPHFTPSPHLKKLVQKSNEPNSDISR
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
atggcagatattaaccgtcaagatatcattcggggcatgatggcggaggttgatggactg
agctatagtatggcttcagcaagtcttgaggcagtgattacctgtctcacccaagctctc
gctaatcaccaatcgattatgttgagtgattttggcaagtttggggtacgccatcgtcgc
gcccgttcgggaagtcatcctcgcactcatcagcccattacaattcccgaagttaccgtt
ccccatttcacccccagtcctcatttaaaaaagctggtgcaaaagtccaatgagcctaat
tctgacatttctcggtaa
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