Pseudanabaena sp. ABRG5-3: ABRG53_1349
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Entry
ABRG53_1349 CDS
T05820
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pser
Pseudanabaena sp. ABRG5-3
Brite
KEGG Orthology (KO) [BR:
pser00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pser03009
]
ABRG53_1349 (rimO)
Enzymes [BR:
pser01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ABRG53_1349 (rimO)
Ribosome biogenesis [BR:
pser03009
]
Prokaryotic type
ribosomal protein modification factors
ABRG53_1349 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Mur_ligase_C
CLP1_P
TK
Thioredoxin_6
DUF5005
Motif
Other DBs
NCBI-ProteinID:
BBC23606
UniProt:
A0A2Z5WWQ4
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All DBs
Position
complement(1471954..1473303)
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AA seq
449 aa
AA seq
DB search
MVNLVPTVKPTIKPTIAFSHLGCEKNRVDTEHMLGLLVQAGYQVDSNEELADYVIVNTCS
FIEDARRESVRTLVELAEMGKRIVIAGCMAQHFQQELLDEIPEAVALVGTGDYQKIVDVI
ERAEQGERVKEVTQVPTYIADDTIPRYRTTNEAVAYVRVAEGCDYRCAFCIIPHLRGDQR
SRSIESIVTECDRLASEGVKEIILISQITTNYGQDIYGQPQLAELLTALGQVDVPWVRMH
YAYPTGLTPKVINAMKATPNVVPYLDLPLQHSHPDVLRAMNRPWQGRVNDKIMEQIKASL
PNAVTRTTFIVGFPGETEEQFEHLLEFVKRHEFDHVGVFTFSAEEGTPAFDLPDQLPEEV
KQERRDRIMAAQQEISFKKNQLEIGKTVDVLIEQENPDTGELIGRSARFAPDVDGVVYVS
DPLGKATLGSMFSVKITSADHYDLFGEIV
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatctggttcctactgtcaaacccacgatcaagcccacgatcgctttctcccat
ttgggttgtgaaaagaaccgtgtcgatactgaacacatgctgggattactagtgcaggct
ggctatcaggtagatagcaacgaagaattagccgactatgtgattgttaatacctgtagt
tttatcgaagatgcccgtcgggaatcggtgcgaactttagtagaactagcagaaatgggc
aaacgtattgtaattgcgggctgcatggctcaacattttcaacaggaattactcgatgaa
attcctgaagcggtggctctcgttggtacaggcgactatcaaaaaattgtcgatgtaatt
gaacgtgccgagcaaggcgaacgagttaaagaagttacgcaagtccctacctatattgct
gatgacaccatccctcgctatcgcactactaatgaagctgtagcctatgtgcgggttgct
gaaggttgtgattatcgctgtgccttttgtatcattccccatttacgtggagatcagcga
tcgcgctctattgaatcaattgtgaccgaatgcgatcgccttgcctctgaaggcgtaaaa
gagataattctcatctcacaaatcactaccaattatggtcaagatatttatggtcagcct
cagcttgccgagctactaactgcccttgggcaagtggatgtaccttgggtgagaatgcac
tacgcctaccccacaggcttgactcccaaggtgatcaatgcgatgaaagccacacctaat
gtagttccttacttagatttgcctttgcagcattctcatcctgatgtattgagagcgatg
aatcgtccttggcaggggcgagttaatgacaagatcatggagcagatcaaggcatctctt
cccaacgcagtcacccgtactactttcattgtcggtttccctggggaaactgaggaacag
ttcgagcatttattagaatttgtgaagcgccatgagtttgatcatgtgggcgtatttact
ttctctgccgaagaaggaactcctgccttcgatctgcctgatcaattacctgaagaagta
aaacaagaacgtcgcgatcgcatcatggcagcccagcaagagatttctttcaagaaaaac
cagttggaaattggcaaaactgttgatgtgttgatcgagcaggaaaatcctgatactggc
gaactcatagggcgatcggcaagatttgcaccagatgttgatggtgtagtctatgtcagc
gatcctctaggcaaggcaacgcttggctcgatgttttctgtcaaaatcacctccgctgat
cattacgacctatttggcgaaattgtctaa
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