Pseudanabaena sp. ABRG5-3: ABRG53_1774
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Entry
ABRG53_1774 CDS
T05820
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pser
Pseudanabaena sp. ABRG5-3
Pathway
pser03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pser00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABRG53_1774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pser03019
]
ABRG53_1774
03016 Transfer RNA biogenesis [BR:
pser03016
]
ABRG53_1774
Enzymes [BR:
pser01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ABRG53_1774
Messenger RNA biogenesis [BR:
pser03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ABRG53_1774
Transfer RNA biogenesis [BR:
pser03016
]
Prokaryotic type
tRNA degradation factors
ABRG53_1774
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
KH_2
KH_NusA_2nd
KH_NusA_1st
KH_KhpA-B
DUF1827
Motif
Other DBs
NCBI-ProteinID:
BBC24031
LinkDB
All DBs
Position
complement(1962716..1964860)
Genome browser
AA seq
714 aa
AA seq
DB search
MDAVTKIIPFYGREIKLRIGTFAPQAGGSVLVQCGETAILVTATRGPAREGVDFVPLLVD
YEERLYAAGRIPGGFLRREGRPPEKATLICRLIDRPMRPLFPNWLRDDIQIVATTMAIDE
KVPPDVLAVTGASLAALIAGLPFMGPMAGVRVGLVGDEFIINPTYAEVEAGDLDLVVAGT
AEGIIMVEAGANQLPEADMIEAIDFGYEAVQELIKAQLDLIQELGIAPPDLTAPETDPTL
ENFIADTVKDKVAEVVASCEKDRNVRDANLDAIKAELLEAIAALPDEDPIKIAADKKVVS
ATYKELTKKLMRLQVIEQSVRIDGRKLDEVRPIWTEVSVLPRVHGSGLFNRGLTQVLSIA
TLGTPGDAQEMDDLHPDAKKRYMHHYNFPPYSVGEARPMRSPGRREIGHGALAERALLPV
LPSKSEFPYILRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPISKPVSGVAMGLIKEGEE
VRILTDIQGIEDFLGDMDFKVAGTDTGITALQMDMKITSISMSTVREAITQAKTGRAHIM
SKMLEILPAPRPQLSPYAPRLLTIRIDPEQIGMIIGPGGKNIKGITEETGAKIDIEDDGT
VMISSMSGEGALKAKRIIENMTRRVGSGDVYLGKVTRIIPIGAFVEFLPGKEGMVHISQL
AEGRVGKVEDEVAVGDEVLIKIREVDSRGRFNLTRLGIHPDEAAAARAAAATNA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgtaacaaaaattatccctttttatggcagggaaattaaattaagaattggc
acgtttgcacctcaggctggcggctcagtattagtccagtgtggggaaaccgcaatttta
gtaacagcgaccagaggtcctgctcgtgaaggtgtagattttgtacccctccttgtggat
tacgaagagcgtttatatgccgcagggcggattcctggtgggttcctgcgtcgtgaaggt
agaccacctgaaaaagcaacattgatctgtcggttgatcgatcgccccatgcgtcccttg
ttccccaattggttgcgtgatgatatccagatcgtcgctactactatggcgatcgatgaa
aaagtcccccccgatgtcttagcggtaactggtgcgtcattggcggcactaattgcagga
ctaccctttatggggcctatggcaggggtaagagttggactagtcggtgatgaattcatt
atcaatcccacctatgctgaagttgaagcgggtgatctagatctggttgtcgctggtact
gccgaaggaatcatcatggtggaagctggggctaatcaattgcctgaagccgacatgatc
gaggcgatcgactttggctatgaagcagtgcaagagctaatcaaggctcaacttgatttg
atccaagagctaggaattgcccctcccgacctcacagctcctgaaactgatccaacttta
gaaaactttattgctgatacagtcaaggataaagttgcggaggtagttgctagctgtgaa
aaggatcgcaatgtccgtgacgctaaccttgatgcgatcaaagctgagcttttagaagcg
atcgctgctttgcccgacgaagatccgatcaaaattgctgcggacaaaaaagtggtcagc
gccacctataaggaacttaccaaaaagctgatgcgattgcaggtgatcgagcagagtgtg
cgcattgatggacgtaaactcgacgaagtgcgccccatctggacagaagtcagcgtatta
cctcgtgtgcatggtagtggtttgtttaatcgtggtctgacacaggtattgtcgatcgct
acccttggcactcctggagatgctcaggaaatggacgatttgcatcctgatgcgaagaag
cgctatatgcaccactacaacttccccccttactcagtgggtgaagcgagaccaatgcga
tcgcctggtcgtcgcgaaattggtcacggagccttagccgaacgcgccctgttgcccgta
ctaccatcgaaatctgaatttccctatattctgcgtgtcgtttctgaagtcttatcctcc
aacggatcaacctcaatgggttctgtctgtggatcaactcttgctttgatggatgcaggt
gttccgatctctaaacccgttagcggtgtagcgatgggcttaatcaaagaaggtgaagaa
gttcgtatcttgactgacattcaaggtatcgaagactttcttggtgacatggacttcaaa
gtagctggtacagacactggtatcactgctctgcaaatggacatgaagattactagcatc
tccatgagtactgtgcgtgaggcgatcactcaagcaaaaactggtcgcgctcatatcatg
tccaaaatgctggaaattcttcctgcgccaagacctcagctttctccctacgcaccacgc
ttgctgaccattcggatcgatcctgaacaaatcggcatgatcattggacctggtggtaag
aatatcaagggtatcaccgaggagacgggagccaagattgatatcgaagatgatggcact
gtaatgatttcctcgatgagtggcgaaggtgcgctcaaggcgaaacgcatcatcgaaaat
atgacccgtcgcgtcggttcaggtgatgtctatctcggcaaagtcacaaggattattccc
attggcgcatttgttgagtttctccctggaaaggaaggaatggtacatatctcgcaactt
gccgaagggcgtgttggcaaagtcgaagatgaagttgccgttggtgatgaagttctaatt
aaaatccgcgaagttgacagtcgtggacgctttaacctaactcgtctgggtattcatccc
gatgaggcagccgcagctcgtgcagccgccgcaactaacgcataa
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