Pseudanabaena sp. ABRG5-3: ABRG53_1973
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Entry
ABRG53_1973 CDS
T05820
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pser
Pseudanabaena sp. ABRG5-3
Pathway
pser03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pser00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABRG53_1973 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pser03400
]
ABRG53_1973 (uvrB)
DNA repair and recombination proteins [BR:
pser03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABRG53_1973 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABRG53_1973 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_5
AAA_16
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BBC24230
UniProt:
A0A2Z5WY71
LinkDB
All DBs
Position
complement(2175602..2177605)
Genome browser
AA seq
667 aa
AA seq
DB search
MALFDIRTPWQPTADQPKAIAQLLDGLQKGLRYQTLLGATGTGKTMTVANAIAKYQKPTL
VLAHNKTLAAQLCNELREFFPNNAVEYFISYYDYYQPEAYIPVTDTYIEKTASINDEIDM
LRHSATRSLFERKDVIVVASVSCIYGLGIPEEYLKASIPLAVGVEYDQRELLKALTNVQY
ERNDIELGRGKFRVKGDILEIGPAYEDRTIRLEFFGDEIEAIRYVDPVTGEILQSMEALN
IYPARHFVTPADRLEIACADIKKELEERLEELTNAGKLLEAQRLEQRTKYDLELLQEVGF
CNGVENYSRHLAGRQAGESPACLVDYFPKDDWLLIVDESHVSIPQIRGMYNGDRARKMTL
IDHGFRLPSAADNRPLKADEFWDMVKQCIFVSATPGDWEMEVSEQVVEQIIRPTGVVDPE
IFVRPTEGQVDDLYHEIQLRIKRKERVLITTLTKKMAEDLTTYFQERNLSVRYLHSDIKS
IERIEILQALRKGEFDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRAERSLIQTIGRA
ARNVAGQVIMYADRLTNSMEKAISETERRRRIQIKHNEDNNITPRSIVKSIEGNAILDFL
SVSRRLNERQLEYVVNNAKEISLDDIPAIIEQLEAQMKDAAKKQEFEQAAAFRDKIKALR
DRLLGKA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggccctgttcgacatccgtaccccttggcaacccaccgccgatcaacccaaagcgatc
gcccaactgctcgatggtttacaaaaaggactacgttatcagaccttactgggcgcaacg
ggtactggcaaaacgatgactgtggctaatgcgatcgccaaatatcagaagcccacccta
gtgctagcccataacaagaccttggcggcgcagctatgtaatgaattgcgcgaattcttt
cctaataatgccgtcgaatatttcattagttattacgattactatcagccagaggcatat
attcccgttaccgatacctatattgaaaaaactgcttcgattaacgatgaaatcgatatg
ttgcgccactcggcaacacgatcgctttttgagcgtaaagatgtaattgtagttgcctcc
gtaagctgtatctatggtttgggaattcccgaagaatatcttaaggcttcgattccctta
gcagtcggggtggaatatgaccaaagggaattgctcaaggctctaaccaatgtgcagtac
gagcgcaatgatatcgagctaggtcgtggtaagtttcgcgtcaagggtgacattttagaa
attggtcccgcctacgaagatcgcaccattcgcttagaattttttggcgatgagattgaa
gcgattcgctatgtcgatcctgtgacgggtgagattttacaaagtatggaagccttgaat
atctatcctgcaaggcactttgtcactcccgccgatcgcttagaaattgcctgtgccgat
attaaaaaagaattagaagagaggttagaagagttaaccaatgcaggaaaattgctagag
gctcaacggctggaacagcgcactaagtacgatctggaactattgcaagaagtcggattc
tgtaatggcgtagaaaactattcgcggcatctcgcaggacgacaagcgggagagtcccca
gcctgtttagtggactattttcctaaggatgattggttgctgattgtcgatgagtcccat
gtttccataccgcaaattagagggatgtataatggcgatcgcgcaagaaagatgacgctg
atcgatcatggtttccgtttgcccagtgcggcggataatcgaccattaaaggctgatgaa
ttctgggatatggtcaaacaatgtatttttgtttcggcgacccccggagattgggaaatg
gaagtttcggagcaggtagtcgagcagattatccgtccgacaggtgtggtcgatcctgag
atctttgtccgtccaacagaggggcaagttgatgatctctaccatgagattcaattacga
attaagcggaaagaacgggtcttaatcacaaccctaactaagaaaatggcagaggatttg
actacctattttcaagagcgaaatctatcggtgcggtatctccattccgatatcaaatcc
attgaacggattgaaatcctacaagctttgcgaaaaggggagtttgatgttctgatcggc
gtgaacttgttgcgagaaggtttagacttgcctgaagtgtcactggtggcgattctcgat
gctgacaaggaaggctttttaagagctgagcgatcgctgattcagaccatcggacgggcg
gcgcgaaatgtagcgggacaagtaattatgtatgccgatcgcttgactaatagtatggaa
aaagcgatttccgaaacggaacgccgccgccgcattcagattaaacataatgaagataac
aatattacgccaaggtcaattgtgaaatccattgaaggtaatgcgattctcgattttcta
tctgtttcacgccgcctcaacgagcgtcagcttgagtatgtagtgaataatgcgaaggag
atttctctggatgacattcccgccatcattgagcagttggaagcccaaatgaaggatgca
gcgaagaagcaggaattcgagcaagctgctgcctttcgcgacaagattaaggctctgcgc
gatcgcttacttggtaaagcgtaa
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