Pseudanabaena sp. ABRG5-3: ABRG53_2449
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Entry
ABRG53_2449 CDS
T05820
Symbol
sbcC
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pser
Pseudanabaena sp. ABRG5-3
Brite
KEGG Orthology (KO) [BR:
pser00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pser03400
]
ABRG53_2449 (sbcC)
DNA repair and recombination proteins [BR:
pser03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABRG53_2449 (sbcC)
Archaeal homologous recombinant proteins
ABRG53_2449 (sbcC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
Rad50_zn_hook
AAA_27
SbcC_Walker_B
AAA_21
AAA_15
AAA_29
DUF8429
CC_Bre1
XhlA
Tup_N
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
BBC24706
LinkDB
All DBs
Position
complement(2735342..2738353)
Genome browser
AA seq
1003 aa
AA seq
DB search
MIPQKLRLKNFLSYQQLALDFSGLHVACICGANGAGKSSLLEAISWALWGISRAASEDDV
IHVGSKETQVDFTFIAGGEVYRVIRTRSRNSSTSLEFQVQSEGKFKSLTERKVRSTQQTI
IAHLKMDYETFVNSAYLRQGRADEFMLKRPSDRKQILADMLALSQYDELAERAKDIARTS
KAESAVLENLLLHLREQIQAGEEIAPQLEALRSQLTDLQVWESRDRARLQVVEDLQKQYQ
HVSQQLTWQQQQHNSITGNLAQGSRQLTNLQKQLQQLEASLAQRSQILQDYERYQLLSTQ
ESELECKLQKYQQLSDRRGEFSHKLTSLQSELKGQLRHYQAQLESLVQQETELKVILNRG
SEIEAAIAELHKARAVLQEFDRLHAQSTPLIHRHQVLKHQLEREQTKLSAKLEELIAKRE
QLYLQVKNHDQLLINAQELDRQIESLQKKQVYQQRVHEKGLERRDFLERLKTRLADSEAA
FHKLESKMRQLTVPNAPCPLCDRPLDADHWQLVQKKHKQESRDLQADIWVVKEQQAASNC
EIEVLREEYRVLKKELAPLNDLIQRKGTLQERLKAIAEAKQRLGQIDLEIAALNDCLQNQ
NYMREAWEEMELIDKNIHKFAYDEKNHALARGDVERWRWAEVKQSELKNAQRQADNLSQK
IPDLQTKINQLQERLTKNLIDLEVQHELEQCDRALTQLGYDPDYHQQLRAQKQELTPSLL
RYQDLTRAEQEYPELQQQVNHLQQAQNTHQQELQTITTQISELQAQVQALQGDHAQEINA
LRQNLQNWRSQMDILLAQIGSLQQAQQQLEQSRQREQETLAQIELARHRQRIHTELHQAF
GKNGIQALMLENVLPQIEVEANQILAQLSDRQLNVRFITQKSGKKSDRIIETLDIEIADT
KGTRPYETYSGGEAFRINFAVRLALSRVLAQRKGSTLQTLIIDEGFGSQDQLGCDRLVSA
INAIAPDFECILVITHMPQMKEAFNTLIEVSKNDEGSTVQLVG
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgatccctcagaaattaagattaaaaaatttcttgagctatcaacaattagccttagat
tttagtgggctacatgttgcttgtatttgtggcgcaaatggagcggggaaatcctcatta
ttagaagcaatttcttgggctttgtggggaataagtagagcagcgagtgaagatgatgtc
attcatgttggttccaaagaaactcaagtggatttcacttttatcgcaggtggtgaagtc
tatcgggtgatcagaacgcgatcgcgcaatagttcaacctctctagaatttcaggtgcag
agtgaaggaaaatttaaatccctcaccgagcgcaaggtgcgatcaacccagcagaccatc
attgcgcacctaaagatggattatgaaacctttgttaattcggcatatttacgtcaaggt
cgtgctgatgaatttatgctgaagcgtccgagtgatcgcaaacagattctggcggatatg
ctggctttgtcgcagtatgacgagttggcggaacgggccaaggatattgcaaggactagc
aaggcagaatcggcggttttagagaatttattgttacatttacgggagcagattcaagcg
ggcgaagagattgcaccgcagttagaagctttgcgatcgcagttaacggatttgcaagta
tgggaaagtcgcgatcgcgcccgattgcaagttgtggaagatttacaaaagcaatatcaa
catgtatcgcagcaattaacttggcagcagcaacaacataattcaattacaggaaatctt
gctcaaggctcacgacaactaacgaacctacaaaagcaattacagcaattagaggctagc
ctcgcccagcgatcgcaaattttgcaagattatgaacgttatcaattgctatctacgcag
gagtctgaactagaatgcaagttgcaaaaatatcaacaacttagtgatcgtcgaggagaa
tttagtcataagcttacgagcttgcaaagcgaactcaaggggcaattacgccattatcaa
gcgcagttagagtcattggtacagcaggaaactgagttaaaggtcattctcaatcgaggc
tccgaaattgaagcagcgatcgccgaattacacaaggcaagggcagtcttgcaggaattt
gatcgtctccatgcgcaatctaccccgctaattcatcgtcatcaggtcttgaagcatcaa
ttggaacgagagcaaactaaactctcggcaaaactcgaagaactaattgccaaaagagaa
cagttgtatttgcaagtaaagaatcacgatcaattgctgatcaatgctcaagagctagat
cgccagattgaatcattacaaaaaaaacaagtttatcaacagcgtgtccatgaaaagggg
ttagaaaggcgagattttttggaaagattaaaaacaagattggcagatagtgaagcggct
tttcataaattagaatcgaaaatgcggcagctaactgtgccaaatgcgccttgtccactg
tgcgatcgccccctcgatgccgaccattggcaattagtccagaaaaaacacaaacaggaa
tctcgcgacctgcaagcagatatttgggtggtgaaagaacaacaggctgcctctaattgt
gaaattgaagtattgcgagaagaatatcgtgttttaaaaaaggagcttgcaccgcttaat
gatttgattcagcgtaagggaactttgcaggaaagactcaaggcgatcgccgaggcaaag
caaaggctagggcagattgatctagaaattgcggcattaaatgattgcttacaaaatcaa
aactatatgcgtgaagcttgggaggaaatggaactcattgataaaaatattcataaattt
gcctatgatgaaaaaaatcatgctctcgctcgtggtgatgtggaacgttggcgctgggca
gaggttaaacaatcggaattaaaaaatgctcaacgtcaagcggataatctctcacagaaa
attcctgatctgcaaaccaaaatcaatcaactacaggaacgcttaactaaaaatctgatc
gatctagaagtgcaacatgaactcgaacaatgcgatcgcgctctcacacagctaggctac
gatcctgactaccatcaacaacttcgcgctcaaaaacaagaacttacgccatcacttctg
cgttatcaagacctcacccgtgccgaacaggaatatcccgaactccagcaacaggtgaac
catttgcaacaagcccaaaacacccatcagcaggaattgcaaactatcacgacacaaatc
tcagaattacaggctcaagttcaagctttgcaaggtgatcatgctcaggaaataaatgct
ttgcgccaaaatctgcaaaactggcgatcgcaaatggatatactcctcgcccaaatcggt
agccttcagcaagcccaacaacaactagaacaaagtcgccaacgggaacaggaaaccctc
gctcaaattgaactagcccgtcatcgtcaacgtattcacaccgagttacatcaagccttt
ggtaaaaatggcattcaagcactgatgctcgaaaatgtcttaccccaaatcgaagtggaa
gccaatcaaattctcgcccaacttagcgatcgccaattaaatgtccgcttcattacccaa
aaatctggcaaaaaaagcgatcgcattatcgaaactctcgatattgaaatagctgatacc
aaaggaacaagaccctacgaaacctattcaggtggtgaagccttcagaattaattttgca
gtgcgacttgccctctcccgcgtgcttgctcagcgcaaaggcagcactctccaaacccta
attattgatgaaggctttggcagtcaagaccaattaggatgcgatcgccttgtcagtgcc
attaatgcgatcgcgccagattttgaatgtattcttgtaattactcatatgccccaaatg
aaggaagcatttaatacactcatcgaagtatctaaaaatgatgaaggctcaaccgttcaa
ttagtgggatga
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