Pseudanabaena sp. ABRG5-3: ABRG53_3040
Help
Entry
ABRG53_3040 CDS
T05820
Symbol
sbcD
Name
(GenBank) exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pser
Pseudanabaena sp. ABRG5-3
Brite
KEGG Orthology (KO) [BR:
pser00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pser03400
]
ABRG53_3040 (sbcD)
DNA repair and recombination proteins [BR:
pser03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABRG53_3040 (sbcD)
Archaeal homologous recombinant proteins
ABRG53_3040 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
CheB_methylest
PaaA-like_N
DUF6501
Motif
Other DBs
NCBI-ProteinID:
BBC25297
UniProt:
A0A2Z5X1G2
LinkDB
All DBs
Position
complement(3380953..3382119)
Genome browser
AA seq
388 aa
AA seq
DB search
MRLIHTSDWHLGRKLKGVDRTSEIALALDEILKYAKEYEVDAVLVSGDIFDVPNPTTEAE
RIAYDFFYKLNQLSIPSVAIAGNHDSANRIDSLAHLLSLAGVRALGRPRIAEEGGVVNLE
TASGKLCIGAMPFASERKLLAAEDVWNKDALEQRNDYKTTVTYVLQNLANAFKTDAVNVM
LAHMTVDGAKFTGSEAAFYSGAVYSLSGQSIPSECQYVGLGHIHRPQQIPNAAPTYYAGS
LIQVDFGEVDEEKGFNLIEVETGRPAKVQFQPLTCHKPLKRVECHLGQLDEHLEAHRDYE
GYLKFAIAVDTPPIGLADRVRKVCPQAVMVEPKLIVNESAQVPEPKDYDRFDPIAEFQKF
YSDREKNLSPAVITAFKDLYMEFSEIPA
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttaatacatacttcagattggcatttgggtagaaagttaaaaggagtcgatcgc
acgtctgaaattgccttagccctagacgaaatcctcaaatatgcaaaggaatatgaagtg
gatgcagttttagtatcaggcgatattttcgatgtgccgaatcccacgactgaagctgag
cgcattgcctatgactttttctacaagctcaatcagttaagtattccctcagtcgcgatc
gcaggaaatcatgactcagctaatcgcattgatagcctcgcccatttgttatccctcgca
ggggtgagagctttaggtcgtcccagaattgcggaagaaggtggcgtagtcaatctagaa
actgcgagcggtaaactttgcatcggtgcgatgcccttcgcctccgaacgaaagttatta
gctgcggaggatgtctggaataaggatgctttggaacagcgaaatgattacaaaaccaca
gttacctatgttcttcaaaatctcgctaatgcctttaaaaccgatgcggtgaatgtgatg
ctggcgcatatgaccgttgatggcgcaaagtttacaggttcggaggcagctttttatagt
ggtgctgtttatagtctttcggggcaatcgattccttcggaatgtcagtatgtgggatta
ggacatattcatcgaccacagcagattcctaatgctgcgccgacctattatgctggttct
ctaattcaagtggattttggagaggtagacgaagagaaaggatttaatttaattgaagtg
gaaactgggcgacctgcaaaagtgcaatttcaaccactcacctgtcataagcccctcaag
cgggtggaatgtcatttaggacaattagatgagcatctagaagcccatcgtgattatgaa
ggctatttgaaatttgcgatcgctgtggatacgccgcccatcggactcgcggatcgggtg
cgaaaggtttgtcctcaagcggtaatggtcgagccgaagttaatcgtcaatgaatcggca
caggttccagaacccaaagattacgatcgcttcgatccgatcgcggagtttcaaaagttt
tatagcgatcgggaaaaaaacttatcgcctgcagtaattaccgcttttaaagatttatat
atggaatttagcgaaatacctgcttaa
DBGET
integrated database retrieval system
