Pseudanabaena sp. ABRG5-3: ABRG53_3616
Help
Entry
ABRG53_3616 CDS
T05820
Symbol
groEL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pser
Pseudanabaena sp. ABRG5-3
Pathway
pser03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pser00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABRG53_3616 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pser03019
]
ABRG53_3616 (groEL)
03110 Chaperones and folding catalysts [BR:
pser03110
]
ABRG53_3616 (groEL)
03029 Mitochondrial biogenesis [BR:
pser03029
]
ABRG53_3616 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pser04147
]
ABRG53_3616 (groEL)
Enzymes [BR:
pser01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ABRG53_3616 (groEL)
Messenger RNA biogenesis [BR:
pser03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ABRG53_3616 (groEL)
Chaperones and folding catalysts [BR:
pser03110
]
Heat shock proteins
HSP60 / Chaperonin
ABRG53_3616 (groEL)
Mitochondrial biogenesis [BR:
pser03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ABRG53_3616 (groEL)
Exosome [BR:
pser04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ABRG53_3616 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
ABRG53_3616 (groEL)
Exosomal proteins of breast cancer cells
ABRG53_3616 (groEL)
Exosomal proteins of colorectal cancer cells
ABRG53_3616 (groEL)
Exosomal proteins of bladder cancer cells
ABRG53_3616 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BBC25873
LinkDB
All DBs
Position
complement(4003308..4004966)
Genome browser
AA seq
552 aa
AA seq
DB search
MSKIVVFDEESRRALERGVNALADAVRVTLGPKGRNVVIEKKYGAPQIINDGVSIAKEIE
LEDPLENAGAQLIREVASRTNDVAGDGTTSATVLAQEFIREGLRNVAAGANPVGVRRGIE
KAVAHLVGVIAEKAKAVDSNAEIAQIATISAGNDPEVGEMIAHAMDKVGKDGVITVEESK
SLTTELEVVEGMQLDRGYISPYFVTDSERQLVEFENAKVLLTDKKINVIQDLVPILEKAA
RSGSPLVIISEDVEGEALATLVVNKLRGSLNIAAIKAPGFGDRRKALLQDIAVLTNGQVI
SEDAGLELSAATLEQLGTIRKITISKDKTTIVSDISNKANVDKRVAQIRKELELSDSDYD
KEKLQERIAKLSGGVAVIKVGAATETELKDRKLRIEDALNSTRAAVEEGIVPGGGATLAH
LSVELQEFKATLKNEEAIGADIVARSLSAPLRQISDNAGLEGTVVVEKVKQLPFNHGFDA
LKGEYVDLIATGIIDPAKVVRSALQNAASVAGMVLTTEALVVEKPEKKSDAGAAGMGGMG
GMGGMGGMGGMM
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaatcgtagtatttgatgaagaatctcgccgcgcccttgagcgtggtgtcaat
gccctcgctgacgcagtacgtgtcacccttggtcctaaagggcgtaacgtagttatcgaa
aagaaatatggcgctcctcaaatcatcaatgatggtgtgagcatcgctaaggaaattgaa
ttagaagatcctttagaaaatgcaggcgcacaactcattcgtgaagttgcttctagaacc
aatgatgtagcaggtgatggtactactagcgctaccgttttggctcaagaatttattcgt
gaaggtttgcgtaacgttgccgcaggtgctaacccagtgggtgtacgtcgcggtatcgaa
aaggcagttgctcacttggttggcgtaattgctgaaaaagctaaggcagttgattccaat
gcagaaatcgcgcaaatcgccactatttccgcaggtaatgatcctgaagttggcgaaatg
attgcccatgcgatggacaaagttggcaaagatggcgtaatcaccgttgaagagtctaag
tccctcacaaccgaattggaagttgttgaaggtatgcagcttgatcgcggttatatttct
ccttatttcgttaccgacagcgagcgtcagttggtagaattcgagaatgctaaggttctc
ctcaccgacaagaagatcaacgttattcaagacctcgttcccatcttggaaaaggcagct
cgttctggttctcctctcgtcattatttctgaagatgttgaaggtgaagctctcgcaact
ctagttgttaacaagctcagaggttctctgaatatcgctgctatcaaagctcctggattt
ggcgatcgccgtaaggcattgttacaagacatcgctgttctcaccaatggacaagtcatt
tctgaagatgctggtttagaactcagtgctgcaaccttggaacagcttggtacaatccgt
aagatcaccatttctaaggacaagaccaccattgtttctgacatttccaacaaggcaaat
gttgacaagcgtgttgctcaaatccgtaaggaattggaactcagcgactctgattacgat
aaagaaaagctccaagagcgtattgctaagctctctggtggcgtagctgtaatcaaagtc
ggtgcagcaactgaaactgaacttaaggatcgtaagcttcgcatcgaagatgcgctcaac
tctactcgtgcagccgttgaagaaggtatcgtccccggtggtggtgcaaccctcgctcac
ttgtcagttgaattgcaagagttcaaggcaaccttgaagaacgaagaagcgatcggtgcg
gatatcgttgcgcgttctctctctgcaccacttcgtcaaatcagcgataacgctggtctc
gaaggaactgtggtcgttgaaaaggttaagcaactacctttcaatcatggttttgatgca
cttaagggcgaatatgttgacttgatcgctactggtatcattgaccctgctaaggttgta
cgttcggcattgcaaaatgctgcttccgttgctggcatggtcttgaccaccgaagctctc
gtggttgagaagccagagaagaaatctgacgctggtgctgctggcatgggcggtatgggc
ggtatgggtggcatgggcggtatgggtggcatgatgtaa
DBGET
integrated database retrieval system
