Pseudanabaena sp. ABRG5-3: ABRG53_3888
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Entry
ABRG53_3888 CDS
T05820
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pser
Pseudanabaena sp. ABRG5-3
Brite
KEGG Orthology (KO) [BR:
pser00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pser03016
]
ABRG53_3888
Enzymes [BR:
pser01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
ABRG53_3888
Transfer RNA biogenesis [BR:
pser03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
ABRG53_3888
Prokaryotic type
ABRG53_3888
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
BBC26145
UniProt:
A0A2Z5X3G9
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All DBs
Position
4310437..4311375
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AA seq
312 aa
AA seq
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MQITFLGTSSGVPTRGRNVSSVAVRLPQRAEVWLLDCGEATQHQLLRSDVKISQITKIFI
THMHGDHIFGLPGLLASCGMAGNVSHIDIYGPSGLGEYLDACLRYSETRLSYSIKVHRVK
TGIVCEDSEFYVMAAPLKHKVTAHGYRLVERDRAGKFDVDKAIAMNIPAGPIFGELKQGK
MVTLPDGRKIDGKEFCGAPQIGRKIAYCTDTIFCDSSVELAQNADVLIHETTFAHQDSDM
AFQRLHSTSTMAAQVALLANVKQLIMTHFSPRYAPGNAILLEDLVNEARMIFANTIPAHD
FMTYEIAPSHSS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacttttctcggtactagttcgggggttcccactcgcggacgcaatgtctct
agtgtggcagtgcgtttacctcaacgtgctgaggtatggttgctcgactgcggcgaggca
acccaacaccagttactccgaagtgatgtgaaaattagccaaattaccaaaattttcatc
acgcatatgcatggtgatcatatttttggtttaccagggttattagcaagttgtggcatg
gcaggtaatgtcagccatattgatatttatggcccatcaggtttgggggaatatcttgat
gcttgtttacgctatagcgagacaagactctcatattcgatcaaagtgcatcgagtgaag
acggggatcgtctgcgaagattccgagttttatgtaatggcggctcctcttaagcataag
gtgacggcgcatggctatcgtttggtagaacgcgatcgcgcaggtaagtttgatgtcgat
aaggcgatcgcgatgaatattcctgcgggtccaatttttggtgaattaaaacagggcaaa
atggtcactctgcccgatggacgcaaaatcgatggtaaagaattctgcggcgctcctcag
attgggcggaagattgcctattgcacggatacgattttttgtgatagttcggtggagttg
gcgcaaaatgctgatgttctcatccatgaaactactttcgctcatcaagattccgatatg
gcttttcagcgtttgcactccactagcacgatggctgcccaagtagcacttttggcgaat
gtgaagcaattaatcatgacccatttcagtccccgctatgcccctggcaatgcgattcta
ctggaagatttggtgaatgaggcaaggatgatttttgccaatactatccctgcccatgat
ttcatgacctatgaaatagctccttctcattcatcctaa
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