Pseudanabaena sp. ABRG5-3: ABRG53_3923
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Entry
ABRG53_3923 CDS
T05820
Symbol
dnaK
Name
(GenBank) chaperone protein
KO
K04043
molecular chaperone DnaK
Organism
pser
Pseudanabaena sp. ABRG5-3
Pathway
pser03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pser00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABRG53_3923 (dnaK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pser03019
]
ABRG53_3923 (dnaK)
03110 Chaperones and folding catalysts [BR:
pser03110
]
ABRG53_3923 (dnaK)
03029 Mitochondrial biogenesis [BR:
pser03029
]
ABRG53_3923 (dnaK)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pser04147
]
ABRG53_3923 (dnaK)
Messenger RNA biogenesis [BR:
pser03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ABRG53_3923 (dnaK)
Chaperones and folding catalysts [BR:
pser03110
]
Heat shock proteins
HSP70 / DNAK
ABRG53_3923 (dnaK)
Mitochondrial biogenesis [BR:
pser03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
ABRG53_3923 (dnaK)
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
ABRG53_3923 (dnaK)
Exosome [BR:
pser04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ABRG53_3923 (dnaK)
Exosomal proteins of breast cancer cells
ABRG53_3923 (dnaK)
Exosomal proteins of colorectal cancer cells
ABRG53_3923 (dnaK)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Motif
Other DBs
NCBI-ProteinID:
BBC26180
LinkDB
All DBs
Position
4343692..4345551
Genome browser
AA seq
619 aa
AA seq
DB search
MSKVIGIDLGTTNSCVSVLEGGKPVVISSAEGGRTTPSIVAFVKDSNERIVGQVAKRQSV
TNSVNTVYSIKRFIGRGWAETEDERRRVPYTAVKGKDDTVDVQIGDRAYTPQEISAMILQ
KLKQDAENYLGEEVTQAVITVPAYFTDTQRQATKDAGAISGMEVLRIVNEPTAAALAYGL
DKQDQDQIVLVFDLGGGTFDVSVLQLGDGIFEVKATSGNNHLGGDDFDAAIVDWLIADFK
EKEGIDLSTDKTAIQRLKEAAEKAKIELSSAPSTLISLPFIAANETGPKTIELDFTRSKF
DEITAHLVKATLEPTAQALKDAGLLPKEINRIILVGGSTRIPSVQEAISKFFDGKKPDQS
VNPDEAVAIGAAVQAGILGGEVKDLLLLDVIPLSIGLETQGGVFTKNLERNTTIPTSKSQ
IFSTAVDNQSAVEIHVLQGERAMAKDNKSLGKFELEGIRPAPRGIPQIEVSFDIDANGIL
KVSARDVDTGVEQSISITNTGGLSPSEIERMRMEAEVYADEDSARRELANMRNQASNLIR
TVEEILKDNGPTVISQSMRETPLKNMEILKKLYESEEATYEDLQIAIKPLQQSLFELTQA
VEKYSQVERVKQKSSDTLE
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagtaattgggattgaccttgggacgacaaacagttgtgtttcagtgttagaa
ggtggcaaacctgttgtcatctctagtgcagaaggaggacgtaccacaccgagtattgtc
gcctttgtcaaggatagcaatgagcggattgttggtcaggttgctaagcgccaatccgtt
actaactctgtgaatacggtttatagtatcaagcgttttattggtcgcggctgggcagaa
actgaggacgaacgccgccgcgttccttatactgctgttaagggtaaagatgacaccgtt
gatgtgcagattggggatagagcctatacgccccaagaaatttccgcaatgatattgcaa
aagctgaaacaagatgcggaaaactatctaggcgaagaagtaactcaagcggttattacc
gtacctgcttactttactgatacacaacgccaagcaactaaggatgctggggctatttcg
ggaatggaggtcttgcggattgtcaatgagccaacggcggcggcgcttgcctatggcttg
gacaagcaggatcaagatcagattgttctagtgtttgaccttggtggcggtacattcgat
gtgtccgtactgcaactaggggatggtatttttgaagttaaggcaacttcagggaataat
caccttgggggtgatgactttgacgcagcgatcgtcgattggctgattgctgactttaag
gaaaaagagggtattgatttatcaacggataagacggcgatccagcgacttaaagaagct
gccgaaaaagctaagatcgagctatctagcgctccttccaccttaattagtttgccattc
attgcggctaatgagactggacctaagaccattgagctagattttacccgttctaagttt
gacgagattactgcacatctagtaaaagcaacccttgaaccaaccgcccaagcgttaaaa
gatgcagggttgctgcccaaggaaattaatcgcattattttagttggtggctcgacgcgg
attccttcagttcaggaggcaatttctaagttctttgacggcaaaaagccagatcaatcg
gttaatcccgatgaagctgtagcgatcggtgcagccgtgcaagcaggaattctcggtggt
gaggttaaagatctcttgctacttgatgttattccactctccattgggctagaaactcaa
ggtggcgtatttacgaaaaatttagaacgcaacaccacgatccctaccagcaagtcacag
attttctccactgccgttgacaaccaatcggctgtagaaatccatgtcctacagggtgaa
cgtgctatggcaaaggataataagagccttggcaagtttgagctagagggtatacgtcct
gctccgcgaggtattcctcagatcgaagtatcctttgatattgatgctaacggcattctc
aaggtttcagcccgtgatgtggatactggagttgagcaaagtatcagtattaccaataca
ggtggcttgagtcccagtgaaattgaaagaatgcggatggaagccgaggtctatgctgat
gaggactcggctcgtcgcgaacttgccaacatgcggaaccaagcctcgaatctgatccgc
accgttgaagagatccttaaagataatggtcctacggtaatcagtcagagtatgcgtgag
actcctctcaaaaatatggaaatactcaagaaattgtacgaatcagaagaagctacctat
gaggatttacaaattgccatcaagccattacagcagtctttgtttgaactaactcaagct
gtagaaaaatactctcaagttgagcgtgtcaagcaaaagtctagcgatactttagaataa
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