Pseudanabaena sp. ABRG5-3: ABRG53_a053
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Entry
ABRG53_a053 CDS
T05820
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pser
Pseudanabaena sp. ABRG5-3
Brite
KEGG Orthology (KO) [BR:
pser00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pser03032
]
ABRG53_a053 (topA)
03400 DNA repair and recombination proteins [BR:
pser03400
]
ABRG53_a053 (topA)
Enzymes [BR:
pser01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ABRG53_a053 (topA)
DNA replication proteins [BR:
pser03032
]
Prokaryotic type
DNA Topoisomerases
ABRG53_a053 (topA)
DNA repair and recombination proteins [BR:
pser03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABRG53_a053 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BBC26627
UniProt:
A0A2Z5X5A3
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Position
ABRG53a:complement(62277..64547)
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AA seq
756 aa
AA seq
DB search
MKKLLLVESPSKCKTIQAILGSEWQVEASFGHFTELAKDGEDSLGFTMHKDTNKIECRYQ
LTEGKGQQVVSKLRAAVKNASEVVLATDGDREGEGIAWHLQQQLHLRNPKRAVYNQITPT
AVKAAIANAHQLDLNLISAQRARQCLDRLIGFKVSPLVRRTSGGSSAGRVQSVALHIVCQ
REREINAFVPITYWSVWTEYAEGFTAFYAGSSEIEPVLDDQDVTDDAAEVNAESTVESKR
VLSEAEAARIIQVARNHPHVVREATGVTAQKSPLPPFITSSLQQAASVRLGLSPEETMKV
AQELFEGVDLPNGRKGLITYHRTDSTSLAPEFCAEVKEWLSKHDPDNVPKKTTRHREQAN
AQSAHEAIRPTYLSITPKTVRDHLSAKQHQLYELIWRRAVASQCANALIQKSRVIIQAGS
TLWQTRGSILTFAGYTRYWNDLSKDKHIPALTSGQTLALANAGFTQKQTQPPARYSEAKL
VQVLERQGVGRPSTFAAIVKTLKDRTYVLLKGKVLEPSALGMSTDDVLHKTFPDLLRADF
TAGMETTLDEISVGKLEWQSYLIGWHQSYFQPMLARAYTNLGADLQPSDRKNELSDVACP
ACNHPLSKIPSKKVSGGHFLKCEHGCENLVMFWSDRRNQWEIPQPKGENAVTAEVTSFAC
PVCGKPLAKFPYTKDGVDKVMLKCADVQARQRKDHADVVFFWSSQEKWWSKKFGDLDEAA
KPNLGKASTSKEKKTTQGKLKRSSSKVAKPSPKKLS
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagctgttactcgttgaatctccatctaaatgcaaaaccattcaagccatcctc
ggcagtgaatggcaagtggaagcttcctttggtcattttacggaacttgccaaagatggt
gaagatagcttgggctttaccatgcacaaggataccaacaaaattgaatgtcgctatcaa
ttgacggaaggtaaagggcaacaggtagtctccaaacttcgtgctgctgtaaagaatgct
tcagaagtggtgctggctaccgatggcgatcgcgagggtgaggggattgcttggcattta
caacagcaattgcatctgcgtaatcctaagcgggctgtctataaccagattacgcccacg
gcggttaaagctgcgatcgccaatgctcatcagttagatttgaacctgatttcggctcag
agagcgagacaatgtttagacaggttgattggattcaaggtttcgcctttagtacggcgg
acaagtggcggtagctcggcgggtcgggtgcagtcggtggctttgcacatcgtctgtcag
cgcgaacgggagattaatgcctttgtaccgattacttactggtcggtatggacggaatat
gctgaaggcttcaccgctttttatgcgggtagtagtgagattgaacctgtgcttgacgat
caggatgtcaccgatgatgcggcggaagtgaatgcggaatccacggttgagtcaaaacga
gtattgtcagaagcagaagctgcaagaattattcaagtggcgcgtaatcatccccatgtt
gttcgtgaagctacgggtgtcactgctcagaaatcaccattgccgcctttcatcaccagt
tcgctccagcaagctgcttctgtgagattagggctatcgcctgaagagacaatgaaggtg
gctcaagagttatttgagggtgtcgatttaccgaacggtcgtaagggtttgattacctat
caccgcactgatagcactagcttagcgcctgagttttgtgctgaggtgaaggaatggcta
tcaaaacacgatcctgataatgtgcctaagaaaactactcgtcatcgcgaacaggcgaat
gctcaatctgcccatgaagcgattcgtcctacatatttgagtattactccaaaaacggta
agagaccatctcagtgccaaacaacatcaactctatgagttaatctggcgcagagccgtg
gcttctcaatgtgcgaatgctttgattcaaaaaagtcgggtgattattcaagctggttcg
acgctctggcagactaggggcagtattctcacctttgcgggttatacgcgctattggaat
gatttgagtaaggataaacatattcctgctttaacaagcggtcagaccttggctttggcg
aatgcagggtttactcagaaacaaactcagcctcctgctcggtatagcgaggcgaagtta
gtacaggtgttagagcgtcagggtgtgggtagaccgagtacgtttgcggcgatcgtcaag
acgctaaaggatagaacctatgtgttactcaagggtaaggttctcgaaccttcggctttg
gggatgtctacggatgatgtgttgcataaaacttttcccgatctactcagagccgatttt
accgcagggatggagacgactttggatgaaatctcggtgggtaagttggagtggcagagt
tatttgattggttggcatcagtcttattttcagccgatgttggcgcgggcttatacgaat
ctcggtgcggatttacagccaagcgatcgcaaaaatgagctttcggatgtggcttgtcct
gcttgtaatcatcctctcagtaagattccttctaagaaggtgagtggtgggcattttctc
aagtgtgagcatggctgtgagaatctggtgatgttttggagcgatcgccgtaatcagtgg
gagattcctcaaccgaagggtgagaatgcagtgacggcggaggttactagttttgcttgt
cctgtctgtggtaagcctttggctaagtttccctatactaaggatggtgtggataaggtg
atgttgaagtgtgcggatgttcaggcgcggcaacgcaaggatcatgcggatgtggtcttt
ttctggtcttctcaggagaagtggtggtcgaaaaagtttggtgatctggatgaggcggct
aagccgaatttgggtaaagcttcaacgagtaaggagaagaaaactactcagggaaagcta
aagcgatcatcgagtaaagtggctaagcctagtccgaaaaagttgtcttga
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