Pseudanabaena sp. ABRG5-3: ABRG53_b049
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Entry
ABRG53_b049 CDS
T05820
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pser
Pseudanabaena sp. ABRG5-3
Brite
KEGG Orthology (KO) [BR:
pser00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pser03032
]
ABRG53_b049 (topA)
03400 DNA repair and recombination proteins [BR:
pser03400
]
ABRG53_b049 (topA)
Enzymes [BR:
pser01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ABRG53_b049 (topA)
DNA replication proteins [BR:
pser03032
]
Prokaryotic type
DNA Topoisomerases
ABRG53_b049 (topA)
DNA repair and recombination proteins [BR:
pser03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABRG53_b049 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BBC26762
UniProt:
A0A2Z5X5E9
LinkDB
All DBs
Position
ABRG53b:57454..59706
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AA seq
750 aa
AA seq
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MKKLLLVESPSKCKTIQAILGSEWQVEASFGHFTELAKDGEDSLGFTMHSDTNKIECRYQ
LTEGKGQQVVTKLRAAVKNASEVVLATDGDREGEGIAWHLQQQLHLRNPKRAVYNQITPT
AVKAAIANAHQLDLNLISAQRARQCLDRLIGFKVSPLVRRTSGGSSAGRVQSVALHIVCQ
REREINTFVPITYWSVWTEYAEGFTAFYAGSSEIEPVLDDQDVTDDAAEVNAESTVESKR
VLSEAEATRIIQVARNHPHIVREATGVTAQKSPLPPFITSSLQQAASVRLGLSPEETMKV
AQELFEGVDLPQGRKGLITYHRTDSTSLAPEFCAEVKEWLSKHDPDNVPKKTTRHREQAN
AQSAHEAIRPTYLSITPKTVRDHLSAKQHQLYELIWRRAVASQCANALIQKSRVIIQAGS
TLWQTRGSILTFAGYTRYWNDLSKDKHIPALTSGQTLALANAGFTQKQTQPPARYSEAKL
VQVLERQGVGRPSTFAAIVKTLKDRTYVLLKGKVLEPSALGMSTDEVLHKTFPDLLRADF
TAGMETTLDEISVGKLEWQSYLIGWHQSYFQPMLARAYTNLGADLQPSDRKNELSDVACP
ACNHPLSKIPSKKVSGGHFLKCEHGCENLVMFWSDRRNQWEIPQPKGENAVTAEVTSFAC
PVCGKPLAKFPYNKDGVDKVMLKCADVQARQRKDHADVVFFWSSQEKWWSKKFGDLDEAA
KPNLGKVATGKEKKTSQRKPKQLSSKVATE
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagctgttactcgttgaatctccatccaagtgcaaaaccatccaagctatcctc
ggtagtgaatggcaagtggaagcttcctttggtcactttacggaacttgccaaagatggt
gaagatagcttgggctttaccatgcattcagataccaacaaaattgaatgtcgctatcaa
ttgaccgaaggtaagggtcaacaggtggttactaaacttcgggcggctgtgaagaatgct
tcagaagttgtacttgctaccgatggcgatcgcgagggtgaggggatagcatggcattta
caacagcaactgcatcttcgtaatcccaaacgcgctgtctataaccagattacgcctacg
gcggttaaagcagcgatcgccaatgctcatcagttagatttgaacctgatttcggctcag
agagcgagacaatgtttggatcggttgattgggtttaaggtttcaccgcttgtgcgtcgt
actagcggcggtagctcggctggtcgggtgcagtcagtggctttgcacatcgtctgtcag
cgtgaacgggaaattaatacctttgtaccaattacttactggtcggtatggacggaatat
gctgaaggcttcacagctttttatgcgggtagtagtgagattgaacctgtgcttgacgat
caggatgtcaccgatgacgcagcagaagtgaatgccgaatctacggttgagtcaaaacgg
gtattgtcggaagcggaagctaccagaattattcaagtagcccgtaatcatccccatatc
gttcgggaagctacgggtgtgactgctcagaaatcaccgttaccgcctttcattaccagt
tcgctccagcaagcagcttccgtgagattagggctatcacctgaagagacgatgaaggtg
gctcaggaattgtttgaaggtgtcgatttgcctcaaggtcggaaagggttgattacctat
caccgcactgatagtactagtcttgctcctgagttttgtgctgaggtaaaggaatggcta
tcaaaacatgatcctgataatgtccctaagaaaactactcgtcatcgtgaacaagctaat
gctcaatccgcccatgaagcgattcgtccgacctatttgagtattactccaaaaacggtt
agagatcatctcagtgcgaagcaacatcaactctatgagttaatctggcgtagagccgtt
gcttctcaatgtgctaatgctttgattcaaaaaagtcgggtgattattcaggctggttcg
acgctctggcagactaggggtagtattcttacctttgcaggttatacgcgctattggaat
gatttgagtaaggataaacatattcctgctttaacaagtggtcagaccttagctttagcg
aatgcaggttttacgcagaaacaaactcaacctcctgctaggtatagcgaggcgaagtta
gtacaggtgctagagcgtcagggtgtgggtagaccgagtacttttgccgcgatcgtgaag
acgcttaaagatagaacctatgtgttactcaagggtaaggttctcgaaccttcagcttta
ggaatgtctacggatgaggtgttgcataagacttttcccgatctgctcagagccgatttt
accgcagggatggagacgactttggatgaaatctcggtgggtaagttggagtggcaaagc
tatttgattggttggcatcagtcctattttcagccaatgctggcgagggcatatacaaat
ctcggtgcggatttacagccaagcgatcgcaaaaatgagctttcggatgtggcttgtcct
gcttgtaatcatccgctcagtaagattccttctaagaaggtgagtggtgggcattttctc
aagtgtgagcatggctgtgagaatctggtgatgttttggagcgatcgccgtaatcagtgg
gagattcctcaaccgaagggtgagaatgcagtgacggctgaggtgactagttttgcttgt
cctgtctgtggcaagcctttggctaagtttccatacaataaggatggtgtggataaggtg
atgttgaagtgtgcggatgttcaggcgcgtcaacgcaaggatcatgcggatgtggtcttt
ttctggtcttctcaggagaagtggtggtcgaagaagtttggtgatttggatgaggcggct
aagccgaatttgggtaaggtcgcaactgggaaggaaaagaaaacttctcagagaaagcct
aaacaattatcaagtaaagttgctacagaataa
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