Pseudanabaena sp. ABRG5-3: ABRG53_d041
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Entry
ABRG53_d041 CDS
T05820
Symbol
nifS
Name
(GenBank) aminotransferase, class V superfamily
KO
K04487
cysteine desulfurase [EC:
2.8.1.7
]
Organism
pser
Pseudanabaena sp. ABRG5-3
Pathway
pser00730
Thiamine metabolism
pser01100
Metabolic pathways
pser01240
Biosynthesis of cofactors
pser04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
pser00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
ABRG53_d041 (nifS)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
ABRG53_d041 (nifS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pser03016
]
ABRG53_d041 (nifS)
03029 Mitochondrial biogenesis [BR:
pser03029
]
ABRG53_d041 (nifS)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pser02048
]
ABRG53_d041 (nifS)
Enzymes [BR:
pser01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
ABRG53_d041 (nifS)
Transfer RNA biogenesis [BR:
pser03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
ABRG53_d041 (nifS)
Prokaryotic type
ABRG53_d041 (nifS)
Mitochondrial biogenesis [BR:
pser03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
ABRG53_d041 (nifS)
Prokaryotic defense system [BR:
pser02048
]
DNA phosphothiolation system
Sulfur modification proteins
ABRG53_d041 (nifS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_5
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Aminotran_3
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
BBC27006
LinkDB
All DBs
Position
ABRG53d:44527..45732
Genome browser
AA seq
401 aa
AA seq
DB search
MNPDVIYLDNNATTRIDPAVVEAMLPYLTTYYGNPSSMHTFGGQVGKAIQTARSQVAELL
GAEPSEIIFTSCGSEGNNTAIRAALAAQSDRKHVITTQVEHACVMNVCKQLEKQGYTVTY
LSVDRKGQIDLSELEAALTGNTALVTTMYANNETGTIFPIEQIGSLAKEYGATFHVDAVQ
AVGKIPLNLKTSTIDLLTLSGHKLHAPKGVGALYVRRGYRFRPFILGGHQERGRRAGTEN
VASIVGLGKAAELELIHLPNAVQHEKKLRDRLEKFLLSTITDCEVNGDPKNRLPNTTNIG
FKFIEGEAILLSLDRYGICASSGSACTSGSLEPSHVLRAMGLPYTILHGSIRFSLSRYTT
DADIDRVLEVMPSIIDRLRALSPFNSDAAGWLQEREEALVK
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccgatgtaatctaccttgataataatgctactacccgaatcgatcccgccgtt
gtggaagccatgcttccctacctcaccacttattacggcaatccttccagtatgcacact
tttggtggacaggtgggtaaagctattcaaactgcgcgatcgcaagttgccgaactactc
ggagccgaaccctcagaaatcatcttcaccagttgcggatctgaaggaaacaacactgcc
atccgcgcagctcttgcagcccagagcgatcgcaagcatgtaattaccacgcaagtcgaa
catgcttgtgtgatgaatgtttgcaaacagctagaaaaacaaggttataccgtcacttat
ctttctgtcgatcgcaaagggcaaattgatttatcggagttggaggctgctctcactggt
aatacagcgctggtaaccacgatgtatgccaacaatgagacaggcacaatcttcccgatt
gaacaaattggctctttggcaaaggaatatggtgcaaccttccatgttgatgcggtgcaa
gcggttggtaaaatccctctcaacctgaaaaccagtacgattgatttgctgaccctctct
ggacataaactgcacgcacctaaaggcgtgggcgcattatatgtccgtcgtggctaccgc
ttccgtcccttcattcttggtggacatcaggaacgcggacgcagagcaggaactgagaac
gttgccagcatcgttggtctaggcaaagctgcggaattggagttaatccatctcccaaat
gcggtacagcatgaaaagaaattgcgcgatcgcttagaaaagtttctcctctcaaccatt
accgactgcgaagtaaatggagatcctaaaaaccgtctacccaataccaccaacatcggc
ttcaaattcattgaaggagaagcaattctcttatccctcgatcgctacggtatttgcgcc
tcctctggttccgcctgtacctctggctccctcgaaccatcccatgtgcttcgggctatg
ggactcccctacacgattctccacggctccatccgcttcagcctctcccgctacactacc
gatgctgacatcgatcgcgtcctagaagtcatgcccagcatcatcgatcgcctccgtgct
ttatctccctttaacagcgatgctgcgggttggttgcaagagagagaagaggctcttgtt
aagtaa
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