Pseudomonas sp. StFLB209: PSCI_0036
Help
Entry
PSCI_0036 CDS
T03623
Name
(GenBank) putative uncharacterized protein
Organism
pses
Pseudomonas sp. StFLB209
Pathway
pses02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSCI_0036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4347
He_PIG
Cadherin_4
Big_9
Motif
Other DBs
NCBI-ProteinID:
BAP40738
UniProt:
A0A077LCD6
LinkDB
All DBs
Position
complement(46239..53021)
Genome browser
AA seq
2260 aa
AA seq
DB search
MNIDKTQCPNSADLPRVLQRRKPSPLALEARIMFDGAAVATAGDAAKPVVAGEAPTAHIA
ELAKAVAAQSASRVAESAVASKAPAEQPPASVGPLTERASEGLPGDVSKLLFVDGAVTDY
QQIIAAAEPNVKVVILDTARDGITQIAEALQGLQNVESISIVSHGGNGLLLLGNSALYGD
NLSDYQAELATIGNALRTGGEILLYGCDVGAGSAGDSFIRSLAEATGAVVAASTDDTGNV
AGGGNWELEISTGALSSLPVLDTSRLANYDYTLATDSASSVTQLQGLLNSYGGNGEDDTI
TLSGNISFLAGDATLTFSINDGHVTTIEGNGHTIDGGNYRQIMHMNAGNGSLVIKNVTLT
NGMASGRGGLSVDESEPGYNAQSNLGGSGLGGAIYNAGTLTITGSTITGNKATGGGGGGG
HYNYALGGGGGGGSGTAGRGGAGGGDFIYGGGVLYSGQSASGAAGGKGGSYLDSFGGLGG
QPGIAGTGQVISGQGALSIGGSGGAIAGIIGGGGGGAGNVTGATGGHAAGGIYNAATGRL
TINGGSVISNNSAAAGGGGGGGYSSVTYPNAVGNGGDGGNAYGGIWNNGGTAIASADTTF
SGNQASAGFGGTSDGKNGRRDGLDGTANNNGNYVLESTPAVPPTISGTVASQPVNDNATL
QPFSGVTLTGGNVTVTITLDNASKGAFTSAAGFTSSNGGLTYTSASGSAASVQAALRALV
YQPANNHVAVGSTETTTFTLSVNDGTNPAVTNSTTTVVATSINDAPTLTGNMTVPTVLED
ASSNNGTSITSIVGAAFSDPDLNASLAALIVVGNPANLATEGLWQYSTNGGTNWYAIGTV
SVTSGLILSPATLVRFVPVADYNGTTPALTVRALDNTFPGSTSSAAASQTRVTMDTSNNG
GSTFISAATRTISGTITAVNDAPSFTQGGNVTVLEDAGAQTVTGWASNLSVGPGNESGQT
LTFTVSNDNNALFSTQPAIDANGNLTFTAAANASGTATVTVTLKDSGGTANGGVDTSAAQ
TFTITITGVNDAPTGLGNLTLPAILEDASSPAGTAINALPGFNFVDVDAGSSLSGIAVVA
NSADVADGLWQYSVNGSDWYAVGTVSNTDALLLSASTQLRFLPAANYFGSPAALSVRAID
NTFAGAYSTSTASRLDVSGNGGSTPFAASTNTIGISVTSVNDAPDFTAGADVTVLEDAGP
QTIAGWATNLSVGPANESGQTLMFITTNSNNALFSVQPAISPSTGDLAFTAAANANGVAT
VTVRLSDSGGTANGGVNFVEKTFTISVTAVNDAPSGSPTVTGSAQEGQTLTASTSGIVDV
DGLSGVTFNHQWQEFANGSWSDINGANAASFVLGSDQVGKSVRDKVTYTDNGGTLETLFS
GPSATVAGVVPAVSSIDRASAEVVLASATSIVYNVTFNVAVTGVDTSDFILTTTSGNASG
VIDSVSGTGNTRQVTVSSLAGDGTLRLDLKGSNTGIVSGSNTAIGGGFTTGQTYTVDRVA
PVISNLQGPNVPQRVGDTITVTLTVSNDGGVPYTLAPGSTVAGYSLVNLTPMSSTLYRAQ
YVVTDGGTDYAGSASLPVNVGLMDAAGNTATWTTAITQSHDSINANAPSGMQLSNTSLQS
ANSANAVVGTLSTTDLSVVDSFTYTLVAGTGSTDNARFTVVGDELRVSSQALTAGIYSVR
VRSTDSGGNSFERSYSIAVNAYVPPAANPDTALATEAGGVSNATPGVNPTGNVLTNDDGS
DVRTVTAVGGGTVGSPLTGTYGTLTLNSDGSYSYVVNNNSAAVQALRTTADTLTDTFQYT
IADNTLATSTSTLTITIRGANDAPEVNGIVSVREVTEGTPWTYTFPNGMITDVDAGDSLT
WSASLMGGGALPAWLSFDPATRTFTGTPTTVGDIRVTVTATDLSNASASLTFTVRTSAVP
VVTPPVTPPVNPPTEPVTPPVTPPVTPPTEPVTPPVTPPTEPVTPPVTPPVTPPVDPVTP
PVQIADPQVPNTPTPLPPVLAPATNVVLPSVGSGSVLADTGATVNANQLITEQQLGGVST
LTAIEISRPEGANRSIVEAAGSATGAQAGFTQSPVSGAALGVFVNPLNDSAQRQGSTFIS
SPALSSGLTDVGRGGFQVVSLVSEQPGLRVLSGVADQQLSAGQTWNFTVPADAFAHTEQN
PGITLRATLADGRPLPAWLSFNAASGQFEGRPPENFNGELVIKVQARDQNGRTAEANFRV
NGQGSAGANGRAEAPSGRSGLSEQLRAAAKRAPSLAAAGA
NT seq
6783 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgataagacccagtgcccgaattccgccgacctgccccgtgtattgcagcgt
cgtaaaccatcgcccctggcgctggaggctcggatcatgttcgacggtgcggccgttgcg
accgcaggtgatgctgccaaaccggtagtcgctggcgaagcaccgactgcgcacatcgca
gaactggccaaggccgtggccgcacagtcggccagccgggttgcagagtccgcagtggcg
agcaaggcgcctgccgagcaaccaccggcgagtgtggggcctttgaccgaacgggccagc
gaaggtttgccaggcgatgtcagcaaactgttgttcgttgatggcgcggtcaccgattac
cagcaaatcattgctgcggctgagcccaatgtgaaggttgtcatactcgataccgcgcgt
gacggcattacccagattgctgaagcgctgcaaggtctgcagaacgtcgagtcgatcagc
atcgtttcccatggtggcaatggtttgttgctgcttggcaacagtgcgttgtatggcgac
aacctgagcgactaccaggctgaactggcgacgatcggtaatgccttgcgcactggtggc
gaaattctgttgtatggctgcgatgttggtgccggaagcgcaggtgacagctttattcgc
agtctggcagaggcgaccggtgcggtggtcgcagcctcgaccgatgacaccggcaatgta
gccggtggcggcaactgggagctggaaatcagcaccggagccttaagcagcctgccggtc
ctggatacttcgcgcctggcaaactacgactacaccttggccaccgacagcgcttcgtcg
gtcacgcaacttcagggactgctgaattcatacggtggtaatggtgaagatgacaccatt
acgctgtccggaaatatttcgttcctcgccggcgatgcgacactgaccttctcgataaat
gatggccatgtcaccaccatcgagggcaacgggcacactatcgacggcggtaactaccgg
caaatcatgcacatgaatgcaggtaatggcagtcttgtcatcaagaacgtcaccctgacc
aatggcatggccagtggtcggggcggtcttagcgttgatgaaagcgagccgggatacaac
gcgcagagcaacctgggtggttcggggctgggtggggctatctacaacgccgggacactg
accattaccggcagcaccattaccggcaacaaggccaccggtggcggtggcggtggcggt
cattacaattatgctttgggtggcggcggtggcggtggctcaggcaccgcagggcgtggc
ggtgctggtggcggtgacttcatctatggtggaggtgttctttatagcggccaatctgcg
tcgggggcagcgggtgggaagggaggcagctacttagacagtttcggtggtcttggcggt
cagcccggaatagcgggcacaggccaggttatttctggccagggagcgttgagcattggc
ggttcgggcggcgctattgcaggtatcatcggcggtggcggtggcggtgcgggtaatgtt
accggtgcgacgggcggtcatgcggcgggcggtatctataatgctgccaccggcagactg
acaatcaatggcggctcggtcatcagcaataactctgcagccgctggcggtggtggcggt
ggcggctattccagcgttacctacccgaacgctgtcggcaatggcggcgatggcggcaat
gcgtacggcggtatctggaataacggcggcactgcgatcgccagtgccgatacgaccttc
agtggcaaccaggccagtgcaggattcggtggtacatcagacggaaagaatggccgtaga
gatggcctggacggtactgccaataacaacggcaactatgttctggagagcacaccggcc
gtgccgccgaccatcagcggcaccgtcgccagccagccggtcaacgacaatgccacgctg
cagccgttttccggtgtcaccctcaccggcggcaacgttactgtcactatcactctggat
aacgcgagcaaaggggctttcacttctgcggcgggtttcaccagcagcaatggtggtctg
acttataccagcgcctctggcagtgctgcttctgtgcaggctgcattgcgcgccctggtc
taccagccggccaataaccatgtggcggtcggcagtaccgagaccactaccttcacgttg
tcggtcaacgacggcaccaacccggcggtaactaacagcactaccacggtggtcgccacc
tcgatcaacgatgcgccgaccctgaccggcaacatgacggtgccgacggttctcgaagat
gccagcagcaacaacggtacatcgatcaccagcattgttggcgccgccttttctgacccg
gatctcaatgcgtcgctggctgccctgatcgtggtgggcaacccggccaacctggcaact
gaaggcctttggcagtactccaccaatggcggtaccaattggtacgcaatcggtacggtc
agcgttacttccgggctgatactttcgcctgcgacgctggtgcgtttcgtgccggtggcc
gactacaacggcaccactccggccttgacggttcgtgcgctggacaatacgttcccgggt
tctaccagtagcgcagcggcctctcaaacccgcgttaccatggataccagcaataacggt
ggcagcacgtttatttctgctgcgaccagaaccattagcggcaccatcacggcggtcaac
gacgcgccttcgttcacccagggcggtaacgtgaccgtgctggaggacgccggtgcgcaa
acggtgactggctgggccagtaatctcagtgtcgggccgggcaacgagtcagggcaaacc
ctgacctttaccgtcagcaacgataacaatgcgctgttcagtactcagcccgccatcgat
gcgaatggcaatctgacgtttaccgccgctgccaacgccagtggtactgcgacggttact
gtgaccctgaaagattcaggcggcacagccaatggcggggtcgacaccagtgcggcgcag
acctttaccatcaccatcaccggggtcaacgatgcaccgaccgggctgggcaatctgacc
ttgccggcgattctggaagacgcgagcagccctgccggtactgcgatcaatgcgctgccg
ggcttcaatttcgttgatgtcgatgccggttccagcctcagtggcatcgctgtagtggcc
aactccgccgatgtcgccgatgggctctggcagtattcggtcaatggcagcgactggtat
gcggtcggtacggtcagcaataccgatgccctgctgctgtcggccagcacgcagttgcgt
tttctgccggctgccaactacttcggtagtccggctgcgttgagcgtgcgagcgatagac
aacaccttcgctggtgcttacagcaccagcaccgcctcgcgactggatgtgtctggcaat
ggtggctcgacgccgttcgcggccagcaccaacaccattggcatcagcgtgaccagcgtc
aacgatgcgccggacttcaccgcgggggccgatgtgactgtcctggaggacgccgggccg
cagaccatcgcgggctgggccaccaatctgtcggtcgggcctgccaacgagtccgggcag
accctgatgtttatcaccaccaatagcaataacgcgctgttcagcgtccagccagcgata
agcccgagtaccggtgacctggccttcactgcggcggccaacgccaatggggtcgccact
gttaccgtgcggctgagcgacagtggtggcaccgccaatggtggagtgaatttcgtcgaa
aagaccttcactatcagtgtaacggcggtcaatgacgcaccctcgggaagtccgaccgtc
actggcagcgctcaggagggccagaccctgacggccagcacttcgggtattgtcgatgtc
gatggcctgtcaggcgtaacgttcaaccaccaatggcaggagtttgccaacggcagttgg
tcagacatcaacggcgccaacgctgccagctttgttctgggcagcgatcaggtcggcaag
tcggtgcgcgacaaggttacctacacggataacggtggcaccctggaaaccctgttcagc
gggccatcagcgaccgttgccggggtcgtgccagcagtcagctcgatcgatcgtgcttcg
gccgaggtggtgctcgcctcggcgaccagcatcgtctacaacgtgaccttcaacgtggcg
gtcactggcgtagacaccagcgatttcatcctgacgaccaccagtggtaacgcctctggc
gttattgactcggtgagcgggacaggcaatacccggcaagtgacggtcagtagcctggcc
ggtgacggtaccttgcgccttgatctcaaaggctccaacaccggcatcgtgtcgggtagc
aataccgctatcggcggcggcttcactaccggccagacctacaccgtggaccgcgtagcg
ccggtgatcagcaatctgcaggggcccaacgtgccacaacgggtcggtgacaccatcacc
gtgacgctgaccgtgagcaacgatggcggcgtgccttacaccctcgccccgggcagtact
gttgccggatattcgctggtcaatctgacgcccatgagtagcactctctacagagcgcaa
tacgtggtgaccgatggcggcaccgattacgccggctcggccagcctgccggtgaacgtc
ggtttgatggatgctgcaggcaataccgccacctggaccacggccattacccagtcccat
gactccatcaatgccaatgcgccgagcggcatgcaactgagcaacaccagcctgcaaagc
gccaacagcgccaacgcggtggtcgggacactgagtaccaccgacctgagtgtggtggac
tcctttacctacacgctggtcgctggcaccggctccaccgataacgccaggttcacggta
gtcggtgatgagctgcgggtgagcagtcaggcgctcaccgccggtatctattcggtacgc
gtgcgcagcaccgatagcggcggtaactcgttcgagcgcagctacagcattgcggtcaat
gcttatgtgccgccagcagccaaccctgatacggcgctcgccaccgaggcaggcggggtg
agcaatgccacgccgggcgttaacccgaccggcaacgtgcttaccaacgatgacggcagt
gatgtacgcacggtgaccgcagtgggagggggcaccgtgggcagcccgctcaccgggacc
tatggcaccctgacgctcaacagcgacggcagctacagctacgtggtgaacaacaacagc
gcggcggtgcaggcattgcgcaccacggctgacaccctgaccgacaccttccaatacacg
atcgccgacaataccctggccaccagtacctcgaccctgaccattaccattcgcggtgcc
aacgacgcacctgaggtcaatggcatcgtcagcgtgcgcgaggtgaccgaaggcacaccg
tggacctatacgttccccaacggcatgatcaccgatgtcgatgccggtgattcgctgacc
tggagtgccagcctgatgggcggcggagcattgccggcctggctgagctttgaccccgcc
acccgtacctttaccggcaccccgaccaccgtgggtgatatccgcgtgaccgtcacggcg
acggacctgagcaacgcttcggcgagcctgacttttaccgtgcgtaccagtgctgtaccg
gtggtgaccccgcccgtcacaccaccagtcaacccgccaaccgagccggtaacgccgcct
gtcacgccaccggtgacaccaccgaccgaacccgtcacgccgcctgttacgccaccgact
gaaccggtgacgccgccggtcacgccacctgtgacaccgccggttgatccggtgaccccg
ccggtgcagatcgctgatccgcaggtgccgaacacaccgaccccgttgccgccagtgctg
gcgcctgccacgaacgttgttctgccgagcgtcgggtccggcagcgtactggcggatacg
ggagctacggtcaatgccaaccagttgattaccgagcagcagcttggcggtgtcagcact
ctgacggcgatagagatttcgcgccctgagggggccaatcgcagtatcgtcgaagcagcg
ggttccgctactggcgctcaagccggcttcacccagtcgccggtttccggggcggccttg
ggcgttttcgtcaatccactcaacgacagtgctcagcgccagggctcgacctttatcagc
tcgccagcactgagcagcggcctgaccgatgttggccgtggcggcttccaggtggtgtcg
ctggtctctgagcagccaggcctgcgcgtgctgagcggcgttgctgaccagcaactgagc
gctggccagacctggaacttcaccgtaccggccgatgccttcgcccacaccgagcagaac
cccggcatcaccttgcgtgccaccctggccgatgggcggccgctgccggcctggttgagc
ttcaacgcagccagcggccagttcgaaggccgtccgccggaaaatttcaatggcgaactg
gtgatcaaggtccaggcccgtgaccagaatggtcgcactgcggaagctaacttccgggtc
aatggccagggcagtgcgggtgcgaatggccgtgccgaagcgccaagcgggcgtagcggt
ttgtctgagcaactgcgtgccgcagccaagcgggcgccgtcgctggctgcggcgggcgca
tga
DBGET
integrated database retrieval system
