Pseudomonas sp. StFLB209: PSCI_0342
Help
Entry
PSCI_0342 CDS
T03623
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pses
Pseudomonas sp. StFLB209
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pses03032
]
PSCI_0342 (ihfB)
03036 Chromosome and associated proteins [BR:
pses03036
]
PSCI_0342 (ihfB)
03400 DNA repair and recombination proteins [BR:
pses03400
]
PSCI_0342 (ihfB)
DNA replication proteins [BR:
pses03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PSCI_0342 (ihfB)
Chromosome and associated proteins [BR:
pses03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PSCI_0342 (ihfB)
DNA repair and recombination proteins [BR:
pses03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PSCI_0342 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
BAP41044
UniProt:
A0A077LGZ6
LinkDB
All DBs
Position
complement(384808..385125)
Genome browser
AA seq
105 aa
AA seq
DB search
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRV
GRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEEEEAMGYSVEKDQ
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtcggagttgatcgaacgaattgtcacccatcagggtcttctctcatccaag
gatgtcgagttggctatcaagaccatgcttgaacaaatgtctcaatgtctggctaccggc
gatcgaatcgagatccgcgggtttggcagcttctcattgcattatcgtgctccccgtgtt
gggcgcaatccgaagaccggccagtcggtaagcctggacggcaagttcgttcctcacttc
aagcccggtaaagagctgcgtgatcgggtgaatgaggaagaagaggcgatgggctacagc
gtagaaaaggatcagtga
DBGET
integrated database retrieval system
