Pseudomonas sp. StFLB209: PSCI_0397
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Entry
PSCI_0397 CDS
T03623
Symbol
rumA
Name
(GenBank) 23S rRNA m(5)U1939 methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pses
Pseudomonas sp. StFLB209
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pses03009
]
PSCI_0397 (rumA)
Enzymes [BR:
pses01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
PSCI_0397 (rumA)
Ribosome biogenesis [BR:
pses03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PSCI_0397 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
MTS
TRM5-TYW2_MTfase
Methyltransf_11
Methyltr_RsmB-F
RrnaAD
Methyltransf_23
PCMT
Cons_hypoth95
Methyltransf_15
Ubie_methyltran
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
BAP41099
UniProt:
A0A077LH47
LinkDB
All DBs
Position
complement(443670..445025)
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AA seq
451 aa
AA seq
DB search
MAKQQRGLRFQPAGGVKSAQIPVGKKQRLVIERLSSDGRGIAFADGKTWFVAGSLAGEEV
DTRVLNARGKVVEARTERVVRASETRRAAACEYFGRCGGCSVQHMPHDQQLAFKQEMLAE
QLQRVAQVAPEQWAPPLVGSELAYRRRARVAVRWDNKARQLEVGFRAAASQDIVNVRHCP
VLVEELQPLMASLPELLGRLAKPQALGHVELFSGTALALLVRHVAPLAATDLAILGEFCD
QQGVQLWLHGDGEPYPLDPQQTLGYRLEPWDMQLAWRPGDFIQVNAAVNTAMIDQALQWL
APEPGERVMDLFCGLGNFALPLAAQAREVVAVEGVQVMVDRAALNARDNGLQNVKFFQAD
LSQPLTQASWSVKGFSAVLLDPPRDGAFEVVRQIGKSGARRLLYVSCNPATLARDAQELI
KQGYRLKRAGILDMFPQTAHVEAMALFEMKE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacagcaacgagggctgcgtttccagcccgccggtggcgttaaaagcgcgcag
attccggtcggcaagaagcagcgcctggtcattgagcgactgtccagcgacggtcgtggc
attgctttcgctgacggcaagacctggtttgtggccggcagtctggccggtgaggaagtc
gacacgcgggtcctcaacgcccgcggtaaggtggtcgaggcccgtaccgagcgggtggtg
cgggccagcgagacacgacgtgctgccgcttgcgagtatttcggtcgctgtggcggctgc
agcgtgcagcacatgccccacgatcagcaattggcattcaagcaggaaatgctcgcagag
caactgcagcgggtggcccaggttgcgccggagcagtgggcgccgccgttggtcggcagc
gagctggcctaccggcgccgggcccgggtcgcggtgcgctgggacaacaaggcgcgccag
ctggaggtcggcttccgcgctgcggcgagccaggacatcgtcaatgtgcgccattgcccg
gtgctggtcgaagaactccagccgctgatggccagcctgcctgagttgctggggcggcta
gccaagccccaggcattggggcatgtcgagctgttcagtggtacggccctggcactgctg
gtccggcatgtcgcgccgctggctgctaccgatctggccatactgggtgaattctgtgat
caacagggcgtgcagctctggctgcacggcgatggcgagccgtatccgctcgacccgcag
cagaccctgggctatcgcctcgaaccctgggatatgcaactggcctggcggcctggagat
ttcattcaggtcaacgcggcggtcaacaccgcgatgatcgaccaggccctgcaatggctg
gcgcccgagccgggcgagcgggtcatggacctgttctgtggcctgggcaatttcgccttg
ccgctggctgcacaagcccgcgaggtggtggcggtcgaaggtgtccaggtgatggtcgat
cgcgccgcactcaatgcccgcgacaacgggctgcagaacgtgaaatttttccaggctgat
ctttctcagcctttgacgcaggcaagctggtctgtaaaaggattttctgcggtactcttg
gacccaccacgcgacggtgcctttgaagtggtgcgccagatcggcaagtcgggggcccgg
cggttgctgtatgtgtcctgcaaccccgccaccctggcccgtgacgcgcaagaattgatc
aaacagggttaccgcttgaaacgagccggaattctcgacatgtttcctcaaacggcgcat
gtcgaagcgatggcgttatttgaaatgaaagaatga
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