Pseudomonas sp. StFLB209: PSCI_0980
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Entry
PSCI_0980 CDS
T03623
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pses
Pseudomonas sp. StFLB209
Pathway
pses03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSCI_0980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pses03019
]
PSCI_0980
Enzymes [BR:
pses01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PSCI_0980
Messenger RNA biogenesis [BR:
pses03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PSCI_0980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF6932
Motif
Other DBs
NCBI-ProteinID:
BAP41682
UniProt:
A0A077LCE7
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All DBs
Position
1068022..1069425
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AA seq
467 aa
AA seq
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MLKKLFQSFRSPLRTPQQHTRSTPIVLNSNQHSLQRAQFSRHAVNIVERLQSAGYQAYLV
GGCVRDLLLQINPKDFDVATSATPEQIRAEFRNARIIGRRFKLVHIHFGREIIEVATFRA
NHPDEDEEENTHQSSRNSSGRILRDNVYGTLEDDAQRRDFTINALYYDPVTERILDYANG
VHDIRNRLIRLIGDPEQRYKEDPVRMLRAVRFAAKLNFGIEKHSMLPIRPLAPMLRDIPA
ARLFEESLKLFLSGHGEITFEMLVDLELFDPLFPATAKALEYNPTYTHTLISKALANTDL
RVRQEKPVTPAFMFAALLWPALPARVLRLQERGTPPITAMQDAAHELIVEQCRSIAIPKR
FTLPIREIWDMQERLPRRYGKRADQLLDHPRFRAGYDFLLLRETAGEQTDGLGQWWTDYQ
DANDSERRHMISDLSSKSDETGNGPRKRRRSGSKRKRGSDDADLFND
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagctgttccagtcatttcgttctccactgcgcacgccgcagcaacacacg
cgttcaacgccgatcgtgctcaatagtaatcagcattcgctgcaacgcgctcagttcagc
cgccatgcggtgaacatcgtcgagcgcctgcaaagcgcgggctaccaggcttatctggtc
ggcggctgcgttcgcgacctgctgctgcagatcaaccccaaggacttcgacgttgccacc
agtgccacgcccgagcagatccgcgccgagtttcgtaatgcgcgcatcattggccgacgc
ttcaagctggtgcatatccacttcggccgggaaatcatcgaggttgcgacctttcgcgcc
aatcatcccgacgaagatgaagaagaaaacacccaccagtcatcgcgcaactccagtggc
cggatcctgcgtgacaacgtctacggcaccctggaagacgatgcacagcgccgcgacttc
actattaacgcgctgtactacgacccggtgaccgagcgcatcctcgattacgccaacggt
gtacacgatattcgcaatcggctgattcgcctgatcggcgacccggagcaacgctacaag
gaagacccggtgcgcatgctgcgtgcggtgcgctttgcggccaagctgaacttcggcatc
gaaaaacacagcatgctgccgatccggccgctggcaccgatgctgcgcgatatcccggcg
gcacggctgttcgaggagtcgctcaagctgttcctgtccgggcatggcgagatcactttc
gaaatgctcgtcgaccttgagctgttcgacccgctgttcccggccaccgccaaggcgctg
gaatacaacccgacctacacccatacgctgatcagcaaggcgctggccaacaccgacctg
cgggtgcgtcaggaaaagccagtcaccccggccttcatgttcgcagcgctgctctggcca
gccttgccggcccgggtactgcgcctgcaagagcgcggcacgccgccgatcaccgcgatg
caggacgccgctcacgaactgatcgtcgaacagtgccgcagcattgccatccccaagcgt
ttcaccctgccgatccgcgagatctgggacatgcaggaacgcttgccgcgccgttatggc
aaacgcgccgaccagttgctcgaccatccgcgctttcgcgccggttacgacttcctgttg
ctacgtgaaaccgctggcgaacagaccgatggtctgggccaatggtggaccgattatcag
gacgccaacgacagcgaacggcggcacatgatcagcgacctgagcagcaagtccgacgaa
accggcaacggcccgcgcaagcgccgccgcagcggttcgaaacgcaagcgcggcagcgac
gatgcagacctgttcaatgactga
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