Pseudomonas sp. StFLB209: PSCI_1049
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Entry
PSCI_1049 CDS
T03623
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pses
Pseudomonas sp. StFLB209
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pses03400
]
PSCI_1049
DNA repair and recombination proteins [BR:
pses03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PSCI_1049
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DUF7125
Lon_C
DnaB_C
GvpD_P-loop
AAA_16
AAA_22
SLFN-g3_helicase
AAA
RecA_N
nSTAND_NTPase5
AAA_14
nSTAND3
NTPase_1
Rad51
AAA_5
ABC_tran
AAA_24
MCM
AAA_29
Motif
Other DBs
NCBI-ProteinID:
BAP41751
LinkDB
All DBs
Position
complement(1146331..1147698)
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AA seq
455 aa
AA seq
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MAKAKRLYGCTECGATFPKWAGQCADCGAWNTLVETVLESGAAAAPSGRSGWTGAQTQIK
TLAEVSVEEIPRFSTRSTELDRVLGGGMVDGSVILIGGDPGIGKSTILLQTLCHLAESMP
ALYVTGEESQQQVAMRARRLGLPQDKLRVMTETSIESIIATARVEQPKVMVIDSIQTIFT
EQLQSAPGGVAQVRESTALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GEADGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLSRAQEEVSGSVVMATW
EGTRPMLVEVQALVDDSHMANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKEGFAGLQVVAVTRLEQALDALFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagccaagcgcttgtacggttgcactgaatgcggtgcgacttttcccaaatgg
gccgggcaatgtgccgactgcggtgcgtggaacaccctggtcgaaaccgtgctggagagc
ggcgcagccgcggcgcccagcgggcgtagtggctggaccggggcgcagacccagatcaag
accctggccgaagtcagtgttgaagaaattccgcgtttttctacccgctccaccgagctg
gaccgggtgctgggcggcgggatggtcgatggctcggtgatcctgatcggcggcgatccc
ggcatcggcaaatccaccattctgctgcaaaccttgtgtcatctggccgagagcatgccg
gccctgtatgtcaccggtgaggaatcgcaacaacaggtggccatgcgcgcccggcgtctg
gggctgccgcaagacaagctgcgggtgatgaccgagaccagcatcgagtcgatcattgcc
actgccagggtcgagcaacccaaggtcatggtcatcgactcgatccagaccatctttacc
gaacagctgcaatcggcgcccggtggtgtggctcaggttcgcgaaagcaccgcgctgctg
gtgcgctatgccaagcaaagcggtacggcgatctttctggtcggccatgtcaccaaagag
ggcgcgctggccggcccgcgcgtgttggagcatatggtcgataccgtgttgtacttcgag
ggtgaagccgatggccgcctgcgcctgctgcgggcggtgaagaaccggttcggcgcggtc
aacgaactgggggtgttcggcatgactgaccggggcctcaaggaggtctccaacccgtcg
gcgattttcctcagccgcgcccaggaagaggtgtctggcagtgtagtgatggccacttgg
gaggggacccggccgatgctggtcgaggtgcaggcactggtcgatgacagccatatggcc
aacccgcgccgggttactctggggctggatcagaatcgcctggccatgctgctggcggtg
ctgcatcgccatggcggcatcccgacccacgatcaggatgtgttcctcaacgtggtgggt
ggggtcaaggtgctggaaaccgcgtccgacctggcgctgatggcggcggtgatgtccagc
ctgcgcaaccggccgttgccccatgacctgctggtgttcggcgaggttgggttgtcaggg
gaggtgcgcccggtgcccagtggccaggagcgtctgaaggaggcagccaagcacggcttc
aagcgtgccatcgtacccaagggcaatgcgcccaaagagggatttgccggcttgcaggtc
gtcgccgtcacccgccttgaacaggccctggatgccttgttcgaataa
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