Pseudomonas sp. StFLB209: PSCI_1304
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Entry
PSCI_1304 CDS
T03623
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pses
Pseudomonas sp. StFLB209
Pathway
pses03030
DNA replication
pses03430
Mismatch repair
pses03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSCI_1304
03430 Mismatch repair
PSCI_1304
03440 Homologous recombination
PSCI_1304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pses03032
]
PSCI_1304
03400 DNA repair and recombination proteins [BR:
pses03400
]
PSCI_1304
Enzymes [BR:
pses01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSCI_1304
DNA replication proteins [BR:
pses03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSCI_1304
DNA repair and recombination proteins [BR:
pses03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSCI_1304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
BAP42006
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All DBs
Position
1432103..1432816
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AA seq
237 aa
AA seq
DB search
MNLFQWLRPVVKKTPLDEHQKQRLAALPGGAVLDERPLRQQRWVVLDLETSGLNMNRDQV
LSIGAVVIEDGAIDLGQLFECTIQRVDHKLSPAVLIHGLAPSAIAAGSEPVAALLDFMEF
VGDSPVLAFHAPFDQHMLARALKESLDYRLQHTFFDVAEIAPMLCEQANLRKAGLDDWTR
HFGLHAEERHHASADALVTAELALILFSHARRQGIDSPARLEQSLSQWRRRMQTHSF
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgttccaatggctacgccccgtcgtcaagaaaacgcctctggatgaacaccag
aaacagcgcctggccgcactgccgggcggtgcagtgctcgatgagcggccgctgcgccag
cagcgctgggtggtgctggacctggaaaccagcgggctgaacatgaaccgcgatcaggtg
ctgtcaatcggggcggtggtcatcgaggacggcgccatcgatctgggtcagctattcgaa
tgcacgattcaacgcgtggatcacaagctcagccccgccgtgctgatccacggtctggcg
cccagcgcgattgccgctggcagcgaaccggtcgcagcgctgctggatttcatggagttt
gttggcgacagcccggtgttggcgttccacgcgccattcgaccagcacatgctggcccgg
gccctgaaggaaagcctcgactaccgcctgcagcatacctttttcgacgttgccgagatt
gccccgatgctctgcgaacaggccaacctgcgcaaggccggcctggacgactggacccgc
cacttcggcctgcatgccgaagagcgtcaccatgccagcgccgatgccctggtcaccgca
gaactggcgctgatcctgttcagccacgcccgccgccagggcatcgacagcccggcccgc
ctggagcaaagcctgagccagtggcgcaggcgcatgcaaacgcattccttttag
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