Pseudomonas sp. StFLB209: PSCI_1825
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Entry
PSCI_1825 CDS
T03623
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pses
Pseudomonas sp. StFLB209
Pathway
pses03420
Nucleotide excision repair
pses03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSCI_1825 (uvrD)
03430 Mismatch repair
PSCI_1825 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pses03400
]
PSCI_1825 (uvrD)
Enzymes [BR:
pses01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSCI_1825 (uvrD)
DNA repair and recombination proteins [BR:
pses03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSCI_1825 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PSCI_1825 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Viral_helicase1
AAA_22
Myb_DNA-binding_7
Motif
Other DBs
NCBI-ProteinID:
BAP42527
UniProt:
A0A077LET0
LinkDB
All DBs
Position
complement(1989662..1991845)
Genome browser
AA seq
727 aa
AA seq
DB search
MHDDLSLLLNSLNDAQRQAVAAPMGRQLVLAGAGSGKTRVLVHRIAWLMQVEQASTHSIL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLVQTFQILDSDD
QQRLVKRVIRELGLDEQKWPARQAQWFINGQKDEGLRPQHIQASGDLFLMTMRSIYEAYE
VACQRAGVIDFSELLLRALDLWRDHPGLLEHYQRRFRHVLVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGARIENIQQYSSDFPDAEVIRLEQNYRSTASILKAANGLIV
NNSGRLGKELWTDGGDGELISLYAAFNEHDEARYVVETIESALKSGLSRSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPARGI
GEKTVEAIREHARHSSVSMWEAMCQLVANKGLTGRAASALNGFVELIDNLAAKVMDMPLH
LMTQTVIEQSGLIDYHLQEKGEKGQARVENLEELVSAARAFENSENEEDLSPLAAFLSHA
SLEAGDAQADEHEDSIQLMTLHSAKGLEFPHVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQQLVMTYAETRRLYGSETYNKVSRFVREIPTGLIQEVRLSNSVSRPFGGTP
KVNNSSLFSGTGIPETQFSLGQQVKHAVFGEGVILNFEGAGAQARVQVNFAEGSKWLMMG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatgacctctcccttttgctcaattccctcaacgacgcccagcgccaggcagta
gccgcgcccatgggtcgtcagttggtcctggctggcgctggctccggcaaaacccgcgtc
ctggtgcaccgtatcgcctggctgatgcaggtcgagcaggcctcgacgcactcgatcctg
tcggtgaccttcaccaacaaggccgccgcagagatgcgtcaccgtatcgagcaactgatg
ggcatcagcccggccggtatgtgggtcggcaccttccacggcctggcccatcgcctgctg
cgcgcgcactggcaggaagccggcctggtccagaccttccagattctcgacagcgacgac
cagcagcgcttggtcaagcgggtaatccgtgagctggggctggatgagcagaaatggccg
gcccgccaggctcaatggttcatcaacggccagaaggacgaaggcctgcgcccgcaacac
attcaggccagtggcgatctgttcctgatgaccatgcgcagcatctatgaggcctacgag
gtcgcctgccagcgcgccggggtcatcgacttctccgaactgctgctgcgtgccctggac
ctgtggcgtgaccatcccggcctgctggaacactatcagcgccgtttccggcatgtgctg
gtcgacgagttccaggacaccaacgccgtgcagtacgcctggttgcgcttgctggccaag
ggcggcgacagcctgatggtggtcggcgacgacgaccagtcgatctacggctggcgcggc
gcacgcatcgagaacatccagcagtattcttcagacttccccgacgcagaagtcatccgc
ctggagcagaactaccgctccaccgccagcattctcaaggcggccaacggtctgatcgtc
aataacagtggccgcttgggcaaagagctgtggaccgacggcggcgatggcgaactgatc
agcctgtatgcggccttcaacgaacacgacgaagcacgctatgtggtcgagaccatcgag
agcgcgctcaagagcggtctgtcacgtagcgatatcgctatcctgtatcgctccaacgcc
cagtcccgggtgcttgaagaagcgctgctgcgcgaacgaattccgtaccgtatctatggc
ggccagcgcttcttcgaacgcgccgaaatcaaaaacgccatggcctacctgcgcttgctc
gaaggccgtggcaacgatgctgcgctggagcgggtcatcaatgtgccggcccgcggcatc
ggcgagaagactgtcgaggccatccgcgaacatgcccggcacagcagcgtctccatgtgg
gaagccatgtgccagctggtggccaacaagggcctgaccggccgcgctgccagcgccctc
aacggttttgtcgagctgatcgacaacctggccgccaaggtcatggacatgccgctgcac
ctgatgacccagaccgtcatcgagcaatcggggctgatcgactaccatctgcaggaaaag
ggcgaaaaaggccaggccagggtagaaaaccttgaggaactggtcagcgccgcccgcgct
ttcgaaaacagcgaaaacgaagaagacctgtcgccgctggcggccttcctcagccacgcc
tcgctggaagccggcgacgcccaggccgatgagcacgaagacagcattcagttgatgacc
ctgcacagcgccaaaggcctggaattcccccacgtgttcctggtgggcatggaagaaggc
ctgtttccgcacaagatgagcctcgaagagccggggcgcctggaagaagagcggcgcctg
gcctatgtcggtatcacccgggccatgcagcaactggtcatgacctacgccgaaacccgc
cgcctgtatggcagtgagacctacaacaaggtgtcgcgtttcgtacgcgagatcccgacc
gggctgatccaggaagtgcgcctgtccaacagcgtcagccggccgttcggcggcacccca
aaggtcaacaacagcagcctgttcagcggtaccggcatcccggaaacccagttcagcctg
ggccagcaggtcaaacacgcggtatttggtgaaggcgtgatcctcaacttcgaaggcgct
ggcgcccaggcccgggtgcaggtcaacttcgccgaaggcagcaagtggctgatgatgggc
tacgccaagctcgaagcgatttga
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integrated database retrieval system
