KEGG   Pseudomonas sp. StFLB209: PSCI_1884
Entry
PSCI_1884         CDS       T03623                                 
Name
(GenBank) sigma-24
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pses  Pseudomonas sp. StFLB209
Pathway
pses02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pses00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PSCI_1884
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pses03021]
    PSCI_1884
Transcription machinery [BR:pses03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PSCI_1884
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF PhyR_sigma-like Sigma70_r4 HTH_23 HTH_24 HTH_11 GerE HTH_29 MPAB_Lcp_cat HTH_31 HTH_Tnp_ISL3 HTH_17 HTH_Crp_2 Rv2175c_wHTH Xre-like-HTH HTH_3 HTH_Tnp_4
Other DBs
NCBI-ProteinID: BAP42586
LinkDB
Position
complement(2062344..2062844)
AA seq 166 aa
MSAHHLALHNLYSNHHSWLNAWLRSKLGNAADAADLAQDTFVRLCNRHEPLELKTPRAFL
RTVARGLVIDHWRREELHRAWLHTIAHLPPGEAPSPETRELILELLNAVARMLDGMKPKV
RQAFLLAQCEGLTHKQIAERLGVSIRSVERYVADALYHCYLLRYET
NT seq 501 nt   +upstreamnt  +downstreamnt
atgtctgcccatcatttggccctgcataacctctacagcaatcatcacagctggctcaac
gcttggctgcgcagcaagctgggcaacgctgcagatgccgccgacctggcccaggacacc
tttgtgcgcctgtgcaaccggcatgagcctctggagctgaaaaccccacgcgcgtttctg
cgcaccgtggcacgcgggctggtgattgatcactggcgtcgtgaagaattgcatcgggcc
tggctgcacactatcgcccatttgccgcctggcgaagcaccgtccccggaaacccgtgaa
ttgatcctcgaattgctcaatgccgtggcacgcatgctcgatggcatgaagcccaaagtg
cgtcaggcctttctgctggcacaatgcgaagggctgacccacaagcagatcgctgaacgc
ctgggcgtttcgatacgttctgtggaacgctacgtcgccgacgcgctgtatcactgctac
ctgttgcggtacgagacgtga

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