Pseudomonas sp. StFLB209: PSCI_1884
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Entry
PSCI_1884 CDS
T03623
Name
(GenBank) sigma-24
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pses
Pseudomonas sp. StFLB209
Pathway
pses02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSCI_1884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pses03021
]
PSCI_1884
Transcription machinery [BR:
pses03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSCI_1884
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
PhyR_sigma-like
Sigma70_r4
HTH_23
HTH_24
HTH_11
GerE
HTH_29
MPAB_Lcp_cat
HTH_31
HTH_Tnp_ISL3
HTH_17
HTH_Crp_2
Rv2175c_wHTH
Xre-like-HTH
HTH_3
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
BAP42586
LinkDB
All DBs
Position
complement(2062344..2062844)
Genome browser
AA seq
166 aa
AA seq
DB search
MSAHHLALHNLYSNHHSWLNAWLRSKLGNAADAADLAQDTFVRLCNRHEPLELKTPRAFL
RTVARGLVIDHWRREELHRAWLHTIAHLPPGEAPSPETRELILELLNAVARMLDGMKPKV
RQAFLLAQCEGLTHKQIAERLGVSIRSVERYVADALYHCYLLRYET
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccatcatttggccctgcataacctctacagcaatcatcacagctggctcaac
gcttggctgcgcagcaagctgggcaacgctgcagatgccgccgacctggcccaggacacc
tttgtgcgcctgtgcaaccggcatgagcctctggagctgaaaaccccacgcgcgtttctg
cgcaccgtggcacgcgggctggtgattgatcactggcgtcgtgaagaattgcatcgggcc
tggctgcacactatcgcccatttgccgcctggcgaagcaccgtccccggaaacccgtgaa
ttgatcctcgaattgctcaatgccgtggcacgcatgctcgatggcatgaagcccaaagtg
cgtcaggcctttctgctggcacaatgcgaagggctgacccacaagcagatcgctgaacgc
ctgggcgtttcgatacgttctgtggaacgctacgtcgccgacgcgctgtatcactgctac
ctgttgcggtacgagacgtga
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integrated database retrieval system