Pseudomonas sp. StFLB209: PSCI_1952
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Entry
PSCI_1952 CDS
T03623
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase I
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pses
Pseudomonas sp. StFLB209
Pathway
pses00250
Alanine, aspartate and glutamate metabolism
pses00310
Lysine degradation
pses00350
Tyrosine metabolism
pses00650
Butanoate metabolism
pses00760
Nicotinate and nicotinamide metabolism
pses01100
Metabolic pathways
pses01120
Microbial metabolism in diverse environments
Module
pses_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
PSCI_1952 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PSCI_1952 (gabD)
00310 Lysine degradation
PSCI_1952 (gabD)
00350 Tyrosine metabolism
PSCI_1952 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
PSCI_1952 (gabD)
Enzymes [BR:
pses01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
PSCI_1952 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
PSCI_1952 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
PSCI_1952 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
BAP42654
UniProt:
A0A077LLH5
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Position
2147456..2148898
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AA seq
480 aa
AA seq
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MQLKDSKLFRQQAYINGQWLDADSGQTIKVNNPATNEILGSVPKMGAAETRRAIEAADKA
LPAWRALTAKERGAKLRRWFELMIENQDDLARLMTLEQGKPLAEAKGEIGYAASFIEWFA
EEAKRVYGDVIPGHQPDKRLIVLKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPYSALALAELAERAGIPAGVFSVITGSAGEVGSELTGNPIVRKLSFTGSTEIGRQ
LMAECANDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRIYVQEG
VYDAFAEKLKVAVAKLKIGNGLEEGTTTGPLIDSKAVAKVKEHIDDAVSKGAKVLFGGNS
LEGTFFEPTILVDVPKTAAVAKEETFGPLAPLFRFKDEDDVIAMANDTEFGLASYFYAQN
MSRVFRVAEALEYGMVGINTGLISNEVAPFGGIKSSGLGREGSKYGIEDYLEVKYLCLSI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcaaggattccaaactgttccgccagcaagcctatatcaatggtcagtggctg
gatgcagacagcggtcagaccatcaaggtcaacaacccggctaccaacgagattctgggc
tctgtgccgaaaatgggcgctgccgagacccgtcgtgccattgaagccgccgacaaggcg
ctgccggcctggcgtgcactgaccgccaaagagcgtggcgccaagctgcgtcgctggttc
gagctgatgatcgagaaccaggacgacctggctcgcctgatgaccctggagcaaggcaag
ccgctggccgaggccaagggcgagatcggttacgccgcatcgttcatcgagtggttcgct
gaagaagccaagcgcgtttacggtgacgtgattcctggccaccagccagacaaacgcctg
atcgtgctcaagcagccgatcggtgtgaccgcggccattaccccgtggaacttcccggcg
gcgatgatcacccgtaaagccggccctgccctggcggccggttgcaccatggtgctcaag
cctgcttcgcagactccttactccgctctggctctggccgagctggctgaacgtgccggc
attccggctggcgtgttcagtgtgatcaccggcagcgccggcgaagttggcagcgaactg
accggcaacccgatcgtgcgcaagctgtcgttcaccggctcgaccgaaatcggtcgtcag
ctgatggccgaatgcgccaacgacatcaagaaagtctccctggaactgggcggtaacgca
ccgttcatcgtgttcgacgacgctgacctggataaggccgttgaaggcgcgatcatctcc
aagtaccgcaacaacggtcagacttgcgtgtgcgccaaccgtatctacgtgcaggaaggc
gtctatgacgcgttcgccgagaagctcaaagtggctgtcgccaagctcaagatcggcaac
ggtctggaagaaggcaccaccaccggcccgctgatcgacagcaaggccgtggccaaggtt
aaagagcacatcgacgacgccgtgagcaaaggtgccaaggtgctgttcggtggcaatagc
ctggaaggtacgttcttcgagccgaccattctggtcgacgtgccgaagactgccgccgtg
gccaaggaagagaccttcggtcctctggcgccgctgttccgtttcaaggacgaagacgat
gtcatcgccatggccaacgataccgagttcggtctggcctcttacttctatgctcagaac
atgagccgcgtgttccgcgttgctgaagcgctggagtacggcatggtgggtatcaacacc
ggtctgatctccaacgaagtggcaccgttcggcggtatcaagtcctcgggcctgggccgt
gaaggctccaagtacggcatcgaagactatctggaagtcaaatacctgtgcctgtcgatc
tga
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