Pseudomonas sp. StFLB209: PSCI_2583
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Entry
PSCI_2583 CDS
T03623
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pses
Pseudomonas sp. StFLB209
Pathway
pses03030
DNA replication
pses03430
Mismatch repair
pses03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSCI_2583 (holA)
03430 Mismatch repair
PSCI_2583 (holA)
03440 Homologous recombination
PSCI_2583 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pses03032
]
PSCI_2583 (holA)
03400 DNA repair and recombination proteins [BR:
pses03400
]
PSCI_2583 (holA)
Enzymes [BR:
pses01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSCI_2583 (holA)
DNA replication proteins [BR:
pses03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSCI_2583 (holA)
DNA repair and recombination proteins [BR:
pses03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSCI_2583 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_gamma3
Esterase_PHB
Motif
Other DBs
NCBI-ProteinID:
BAP43285
LinkDB
All DBs
Position
complement(2892817..2893854)
Genome browser
AA seq
345 aa
AA seq
DB search
MKLAPAQLGKHLQGTLAPVYVISGDDPLLCQEAADAIRAAARLQGFDERQVFSADSNFDW
GTLLQAGASLSLFAERRLLELRLPSGKPGDKGAAALIEYCSRPAEDTLLLISLPKLDGSA
QKTKWGKALIDGQHCQFVQIWPVDAGQLPQWIRQRLSQAGLAATQDAVELIAARVEGNLL
AAAQEIEKLKLMAEAGQITVDTVQAAVADSARFDVFGLTDAVLNGEAAHALRILEGLRGE
GVETPVVLWALTRELRSLATMAMQYSQGMPLDKVFSSARPPVWDKRKPLMSKALQRLSSK
RWNQLLLEAQRIDEQIKGQAPGSAWSSLGRLALLMAGQRLALPAE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgcccccgcccaactcggcaaacacctgcaagggactctcgcaccggtctat
gtgatcagtggcgatgaccccctgctttgccaggaagctgctgacgccattcgcgcagca
gcgcgcctgcaaggcttcgacgaacgtcaggtgttcagcgccgacagcaacttcgactgg
ggcaccctgctccaggccggcgccagcctgtcgctgttcgctgaaaggcgcctgctggaa
ctgcgcctgccctcgggcaagcccggtgacaagggcgctgcggcgctgatcgagtattgc
tcgcgcccggctgaagacacgctgctgctgatcagcctgcccaagcttgacggtagcgcg
cagaaaaccaagtggggcaaggcactgatcgacggccaacactgccagttcgtccagatc
tggccggtggacgccggccagttgccgcagtggatccgccaacgcctgtcccaggccggg
ctggccgccacccaggacgcggtggaactgattgccgcacgggtcgaaggcaacctgttg
gctgccgcccaggaaatcgaaaagctcaagctgatggccgaagccggccagatcacggta
gacaccgtgcaggctgcggtggctgacagcgcgcggttcgatgtgttcggcctgaccgac
gcggtgctcaatggcgaagccgcgcatgcgctgcgtattctcgaagggttgcgcggcgag
ggcgtagagacgccggttgtgctttgggccctgacccgcgagctgcgctcgctggcgacc
atggccatgcaatacagccagggcatgccgctggacaaggtgttcagctcagcgcgcccg
ccggtctgggacaaacgcaagccgctgatgagcaaagccctgcaacggctgtccagcaag
cgctggaaccagctgttgctcgaagcccagcgcattgatgagcagatcaagggccaggca
ccaggctcggcctggagcagcctgggccgcctggcactcttgatggcaggccagcgcctg
gcactgcctgccgagtag
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