Pseudomonas sp. StFLB209: PSCI_2895
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Entry
PSCI_2895 CDS
T03623
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pses
Pseudomonas sp. StFLB209
Pathway
pses03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSCI_2895 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pses03019
]
PSCI_2895 (groEL)
03110 Chaperones and folding catalysts [BR:
pses03110
]
PSCI_2895 (groEL)
03029 Mitochondrial biogenesis [BR:
pses03029
]
PSCI_2895 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pses04147
]
PSCI_2895 (groEL)
Enzymes [BR:
pses01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PSCI_2895 (groEL)
Messenger RNA biogenesis [BR:
pses03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PSCI_2895 (groEL)
Chaperones and folding catalysts [BR:
pses03110
]
Heat shock proteins
HSP60 / Chaperonin
PSCI_2895 (groEL)
Mitochondrial biogenesis [BR:
pses03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PSCI_2895 (groEL)
Exosome [BR:
pses04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PSCI_2895 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
PSCI_2895 (groEL)
Exosomal proteins of breast cancer cells
PSCI_2895 (groEL)
Exosomal proteins of colorectal cancer cells
PSCI_2895 (groEL)
Exosomal proteins of bladder cancer cells
PSCI_2895 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Lar_N
Motif
Other DBs
NCBI-ProteinID:
BAP43597
LinkDB
All DBs
Position
3280335..3281978
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKEVKFGDAGRKKMLAGVNVLADAVKATLGPKGRNVIIEKSFGAPLITKDGVSVAKEI
ELKDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKATAAIVVQLKALSKPCTDTKAIAQVGTISANSDTSIGDIIAEAMEKVTKDGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFINKPDTMVAELDSPLLLLVDKKISNIREMLPVLEAV
AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEIGLSLESTTLEHLGNAKRVVLNKENTTIIDGSGNKTDIDARIAQIRQQIGDTSSDY
DKEKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RSLQAIEGLQGDNADQNVGIALLRRAVEAPLRQIVANSGDEPSVVVDKVKQGSGNFGYNA
ATGEYGDMIDLGILDPAKVTRSALQAASSIASLMITTEAMIADIAEDKPAAGGMPDMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagttaaattcggcgatgccggccgtaaaaaaatgctcgcaggcgtt
aacgtcctggctgacgcagtaaaagctaccctgggcccgaaaggccgtaacgtgatcatc
gagaagagcttcggtgctcctctgatcaccaaggacggcgtatcggtcgccaaagaaatc
gaactgaaagaccgcttcgaaaacatgggcgcgcagttggtcaaggacgtagcgtcccgc
gccaacgacgacgccggtgacggtaccaccaccgctaccgtactggcccaggccatcgtc
aacgaaggcctgaaagccgtcgctgccggcatgaacccgatggacctcaagcgcggcatc
gacaaggccactgcggccatcgttgttcagctcaaggcgctgtccaagccttgcactgac
accaaggcaattgcccaggtgggtaccatctcggccaactccgacacttccatcggcgac
atcattgctgaagccatggaaaaagtgaccaaagacggcgttatcaccgtcgaggaaggc
tcgggcctggaaaacgaactgtccgtcgtggaaggcatgcagttcgaccgtggctacctg
tcgccgtacttcatcaacaagcccgacaccatggttgccgagctcgacagcccgctgctg
ctgctggttgacaagaagatctccaacatccgcgaaatgctgccagtgctggaagccgtt
gccaaagccggccgtccgctgctgatcgttgctgaagacgtcgaaggcgaagccctggcg
actctggttgtcaacaatatgcgcggtatcgtcaaggttgctgcggtcaaggccccaggc
ttcggcgatcgccgcaaggccatgctgcaggacatcgcggtcctgaccggtggcaccgtg
atctccgaagagatcggcctgagcctggaaagcaccactctggagcacctgggtaacgcc
aagcgcgttgtactgaacaaagaaaacaccaccatcatcgacggttcgggcaacaagacc
gacatcgatgcgcgtatcgcccagatccgtcagcagatcggcgacaccagctccgactac
gacaaagagaaactgcaagagcgtctggccaagctgtccggcggtgttgctgtgatcaag
gtcggcgccggttccgaagtcgaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgctacccgtgcagccgttgaagaaggcgtggtacctggcggtggcgtggcactggtc
cgctccctgcaggctatcgaaggtctgcaaggcgacaacgccgaccagaacgtcggtatc
gctctgctgcgtcgtgccgttgaagcgcctctgcgtcagatcgttgccaactccggcgac
gagccaagcgtggttgtcgacaaggtcaagcaaggttcgggtaacttcggttacaacgct
gcgaccggtgaatacggcgacatgatcgacctgggtatcctggaccctgccaaagtgact
cgttcggctctgcaagcggcttcgtcgattgccagcctgatgatcaccactgaagcgatg
attgccgatatcgctgaagacaagcctgctgcaggcggtatgcctgacatgggcggcatg
ggtggcatgggcggcatgatgtaa
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