Pseudomonas sp. StFLB209: PSCI_2977
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Entry
PSCI_2977 CDS
T03623
Symbol
rtcR
Name
(GenBank) sigma-54-dependent transcriptional regulator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
pses
Pseudomonas sp. StFLB209
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pses03000
]
PSCI_2977 (rtcR)
Transcription factors [BR:
pses03000
]
Prokaryotic type
Other transcription factors
Others
PSCI_2977 (rtcR)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
AAA_16
NACHT
AAA_22
AAA_2
MCM
AAA_30
AAA_19
AAA_7
AAA_14
ATPase_2
ABC_tran
AAA_33
BrxC_BrxD
TniB
Motif
Other DBs
NCBI-ProteinID:
BAP43679
UniProt:
A0A077LP83
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All DBs
Position
complement(3376731..3378329)
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AA seq
532 aa
AA seq
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MPGKRTVAVGFIGSKLDRVGKGANRWSVWRPTVGLCQQPDLLIDRLELIHSIDARDVSLA
QRVADDIRQVSPETEVRLQPMDLKNPWDFQEVYGALHDFAAAYAFDTEHEDYLIHITTGT
HVAQICWFLLTEARYLPARLVQTSPARRLEPDLRAPGTHSIIDLDLSRYDHIASRFAGKR
LEGLAFLKSGIATRSTTFNRTIEQIERVALRSTAPMLLIGPTGAGKSFLARRIFELKRSR
HQVQGRFVEVNCATLRGDGAMSALFGHIKGAFTGAQNARDGLLRAADGGMLFLDEIGELG
ADEQAMLLKAIEEKRFFPMGSDKEVDSDFLIIAGTHRDLRERVAQGLFREDLYARINLWT
FNLPGLSGRREDIEPNIDFELERHAREQGRLVRFNLEARRRYLDFASSSQAAWLGNFREL
SASITRMATLADSGRIDQSQVEEEIQRLSYAWGLVAEQDDLQPLLQDDLELDLFDRLQLK
AVIDVCRHAGSLSDAGRKLFGVSRQGKANPNDADRLRKYLARYGLEWKQIRG
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgccaggcaagcgcactgtggctgtagggtttatcggctccaagcttgaccgggtcggc
aaaggcgccaaccgctggtccgtctggcggcctactgtcggcctgtgccagcaaccggac
ctgctgattgatcgcctggagctgatccacagcatcgacgcccgtgacgttagcctggcc
cagcgcgtggccgatgacatccgtcaggtctcgccggagactgaagtccgcctgcagccg
atggacctgaaaaatccctgggactttcaggaggtgtatggcgccctgcatgacttcgcc
gcagcgtatgccttcgacaccgagcatgaggactacctgatccacatcaccaccggcacc
cacgtggcgcagatctgctggtttctgctcacagaggctcgctacctgccggcgcgcctg
gtgcagacctcacctgcccgccgtctggaaccggatctgcgcgcaccgggtacccactcg
atcatcgacctggacctgtcgcgctacgaccacatcgcttcgcgcttcgccggcaagcgc
ctggaaggcctggcgtttctcaagtcaggcattgccacccgcagcaccaccttcaaccga
accatcgaacagatcgagcgggtcgcgctgcgctccaccgcaccgatgttgcttatcggc
ccgaccggtgccggcaagtcgtttctggcccggcgcatctttgagctcaagcgcagccgg
catcaggtgcagggccgtttcgtggaagtgaactgcgcgaccttgcgcggcgacggcgcc
atgtcggcactgttcggccatatcaaaggcgcgttcaccggcgcccagaatgcccgcgac
ggcctgctgcgtgcggcagacggcggcatgctgtttctcgacgagatcggcgaactgggc
gccgatgaacaggccatgctgctcaaagccatcgaagaaaaacgcttcttccccatgggt
tcggacaaagaggtcgacagcgactttctgatcatcgccggcacccatcgtgacctgcgc
gagcgagtggcccaagggctgtttcgtgaggacctgtatgcgcggatcaacctgtggacc
ttcaacctccccggcctgagtggccgccgcgaagacatagaaccgaacatcgacttcgaa
ctggaacgtcatgcccgcgagcagggccggttggttcgcttcaaccttgaagcgcggcgc
cgctacctggatttcgccagttccagccaagccgcctggctgggcaatttccgtgagctt
tcagcgtcgatcacgcgcatggcgaccctggccgacagcgggcgcatcgaccagagccag
gtcgaggaagaaatccagcgcctgagctatgcctggggcctggttgccgaacaggacgac
ctgcaaccgctgctgcaagacgaccttgagctggacctgttcgaccgcctgcaactcaag
gcggtgatcgacgtctgccgccacgcaggcagcctgtccgatgccgggcgcaaattgttt
ggcgtgtcccgccagggcaaggccaaccccaacgacgccgaccggttacgcaaatacctg
gcacgctacgggctggagtggaagcagattcgcgggtaa
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