Pseudomonas sp. StFLB209: PSCI_3095
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Entry
PSCI_3095 CDS
T03623
Name
(GenBank) long-chain-fatty-acid-CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pses
Pseudomonas sp. StFLB209
Pathway
pses00061
Fatty acid biosynthesis
pses00071
Fatty acid degradation
pses01100
Metabolic pathways
pses01212
Fatty acid metabolism
pses02024
Quorum sensing
pses04146
Peroxisome
Module
pses_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PSCI_3095
00071 Fatty acid degradation
PSCI_3095
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PSCI_3095
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSCI_3095
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pses01004
]
PSCI_3095
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pses04147
]
PSCI_3095
Enzymes [BR:
pses01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PSCI_3095
Lipid biosynthesis proteins [BR:
pses01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PSCI_3095
Exosome [BR:
pses04147
]
Exosomal proteins
Exosomal proteins of breast milk
PSCI_3095
Exosomal proteins of breast cancer cells
PSCI_3095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
BAP43797
UniProt:
A0A077LIA8
LinkDB
All DBs
Position
3505531..3507222
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AA seq
563 aa
AA seq
DB search
MIETFWKDKYPAGVAAEINPDEYPNVQSVLKQSCQRFADKPAFSNLGKTLTYGDLYELSG
AFAAWIQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFND
SGAKALLCLANMAHLAEKVLPKTQVRHVIITEVADLLPPLKRLLINSVIKYVKKMVPAYN
LPQAVRFNDVLAKGRGRSVNEASPASDDVAVLQYTGGTTGVAKGAMLTHRNLIANMLQCR
ELMGSNLNEGCEVLITPLPLYHIYAFTFHCMAMMRCGNHNVLITNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNQDFRNLDFSALKVTLSGGMALQQAVAERWKEVTHCPICEGYGM
TETSPVATVNPIQNIQMGTIGIPVPSTLCKVIDDAGNELPFGEVGELCVKGPQVMKGYWQ
RQEATEEILDAEGWLKTGDIAVIQPDGYLRIVDRKKDMILISGFNVYPNELEDVLATLPG
VLQCAAIGIPDEKSGESIKVFVVVKPGMTLTKDQVMEHMRANLTGYKVPRAVEFRDALPT
TNVGKILRRELRDEELKKLGVKK
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaccttctggaaggataaatacccggccggtgtggcagccgagatcaacccc
gacgagtatccgaatgtccagagcgtgctgaagcagtcctgccagcgtttcgccgacaaa
cctgctttcagtaacctgggcaagaccctcacttacggcgacctctacgaattgtccggc
gcctttgccgcctggatccagcagcataccgacctcaagcctggcgatcgcatcgccgtg
caattgcccaatgtcctgcaatacccggtagccgtattcggggccatgcgtgccgggctg
atcgtggtcaataccaacccgctgtacaccgcgcgggagatggaacaccagttcaacgac
tccggagccaaagccttgctgtgcctggccaacatggcgcatctggcagaaaaggtactg
cccaagacccaggtgcgtcatgtgatcatcacggaggtggcagacttgttgccgccgctc
aagcgtctgttgatcaacagcgtcatcaagtacgtaaagaagatggtcccggcctacaac
ctgccgcaggccgtgcgcttcaacgacgttttggccaagggacggggccgttcggtcaat
gaagcttcgccggccagcgatgatgtggcggtactgcaatacaccggtggtaccaccggg
gtggccaagggggcgatgctgacccaccgcaacctgatcgccaacatgctgcaatgccgc
gagctgatgggttcgaacctcaatgaaggctgcgaggttcttatcaccccgttgccgctg
tatcacatctatgcgtttacctttcattgcatggcaatgatgcgctgtggcaatcacaac
gtcctgatcaccaatccgcgcgacttgccggcgatggtcaaggaactgtcgaaatggaag
ttcagcggtttcgtcggcctcaataccctgtttgtggccctgtgcaataaccaggacttc
cgcaacctggacttctccgccctcaaggtcacgttgtcggggggcatggccttgcagcag
gctgttgccgaacgctggaaagaggttacccattgcccgatctgtgaaggctacggcatg
actgaaaccagcccggtggccaccgtcaacccgatccagaacatccagatgggcaccatc
ggcatcccggtgccgtcgaccctgtgcaaggtgatcgacgatgcaggcaacgagctgccg
tttggcgaggtcggtgagctgtgcgtcaaaggtccgcaggtgatgaagggctactggcag
cgccaggaagccaccgaggagatcctcgacgccgaaggctggttgaaaaccggcgatatc
gcggttatccagccggacggctacctgcgcatcgttgaccgcaagaaagacatgatcctg
atctccggtttcaacgtgtaccccaatgaactggaagacgtgctggcaaccctgccgggc
gtattgcagtgtgcggccatcggtatcccggacgagaaatcaggcgagtcgatcaaggtc
ttcgtggtggtcaagccgggcatgaccctgaccaaggatcaggtcatggagcacatgcgg
gccaacctgaccggttacaaggtgccgcgtgcggttgagttccgcgacgcgttgccgact
accaacgtcggcaagatcctgcgccgtgagctgcgtgacgaagaactcaagaaactcggc
gtcaagaagtaa
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