Pseudomonas sp. StFLB209: PSCI_3202
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Entry
PSCI_3202 CDS
T03623
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pses
Pseudomonas sp. StFLB209
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pses03009
]
PSCI_3202 (rimO)
Enzymes [BR:
pses01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PSCI_3202 (rimO)
Ribosome biogenesis [BR:
pses03009
]
Prokaryotic type
ribosomal protein modification factors
PSCI_3202 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
YajR_YAM
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
BAP43904
UniProt:
A0A077LPV0
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All DBs
Position
complement(3618926..3620167)
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AA seq
413 aa
AA seq
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MEGYEVVPTYQDADVVVVNTCGFIDSAKAESLEVIGEAIAENGKVIVTGCMGVDENVIRN
VHPSVLSVTGPQQYEQVVTAVHEVVPPNHEHNPLIDLVPPQGIKLTPRHYAYLKISEGCN
HSCSFCIIPSMRGKLVSRPVGDVLDEAQRLVKAGVKELLVISQDTSAYGVDVKYRTGFWN
GQPVKTRMTELCQALSTLGVWVRLHYVYPYPHVDELIPLMAAGKILPYLDIPFQHASPKV
LKLMKRPAFEDKTLARIKNWREQCPELIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRV
GCFQYSPVEGAPANDLDVPEVPDDVKQERWDRFMAHQQAISAARLQMKIGKEIEVLIDEV
DERGAVGRCFFDAPEIDGNVYIGLEDDSPVKPGDKIICRVTDADEYDLWAEVL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggaaggttacgaagtcgtgccgacctatcaggatgccgatgtggtggtggtcaacacc
tgtggcttcatcgactcggccaaggctgagtcgctggaagtgatcggcgaggcgattgcc
gagaatggcaaggtgatcgtgaccggctgcatgggcgtcgacgagaacgtgatccgcaat
gtgcacccgagcgtgctgtcggtcaccggtccccagcagtacgagcaagtggttaccgcc
gttcacgaggtggtgccgcccaatcacgagcacaacccgctgatcgacctggtgccaccg
caaggcatcaagctcaccccgcgccactatgcgtacctgaagatttccgaaggctgcaac
cacagctgcagcttctgcatcatcccgtcgatgcgcggcaagctggtcagccgcccggtg
ggtgatgtactggacgaagcgcagcgtttggtcaaggcgggcgtcaaggaactgctggtc
atctctcaggacaccagcgcttatggcgtggacgtcaagtatcgtaccggcttctggaac
ggccagccggtcaagactcgcatgaccgaactgtgccaggccctgagcactctgggcgta
tgggttcgcctgcactatgtttacccatacccgcacgtcgatgagctgatcccgctgatg
gccgccggcaagatcctgccgtacctggatatcccgttccagcacgccagcccgaaagta
ctcaagttgatgaagcgcccggcctttgaagacaagaccctggcgcggatcaagaactgg
cgcgaacagtgtccggagctgatcatccgctcgacctttattgtcggcttcccgggcgag
accgaggaggacttccagtacctgctcgactggctgaccgaagcccagctcgaccgcgtc
ggctgcttccagtactcgccggtagaaggcgcaccggccaatgacctggacgtgcctgaa
gtccccgatgacgtcaaacaggaacgctgggatcgcttcatggctcaccagcaggcaatc
agcgcggcacgcctgcagatgaagattggcaaggaaatcgaagtattgatcgacgaagtc
gacgagcgcggcgcagtcggccgctgcttcttcgatgccccggaaatcgacggcaacgtc
tacattggtctggaagacgacagcccggtcaaacctggcgacaagatcatctgccgggtc
actgacgcagacgaatacgacctgtgggctgaagtgctgtaa
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