Pseudomonas sp. StFLB209: PSCI_3253
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Entry
PSCI_3253 CDS
T03623
Name
(GenBank) porin D
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pses
Pseudomonas sp. StFLB209
Pathway
pses01501
beta-Lactam resistance
pses02020
Two-component system
Module
pses_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSCI_3253
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PSCI_3253
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pses02000
]
PSCI_3253
01504 Antimicrobial resistance genes [BR:
pses01504
]
PSCI_3253
Transporters [BR:
pses02000
]
Other transporters
Pores ion channels [TC:
1
]
PSCI_3253
Antimicrobial resistance genes [BR:
pses01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
PSCI_3253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
BAP43955
UniProt:
A0A077LHB1
LinkDB
All DBs
Position
complement(3665309..3666631)
Genome browser
AA seq
440 aa
AA seq
DB search
MRVMKWSAIALAVAAAASTQLASAAPFVSDQAEAKGFVEGSSLNLKARNYYYNRDKKAGA
VDDKDWTQGFWGIYNSGYTQGTVGVGVDAFGYLGFNLDGSDKYSGSGNLQTDSQGRNSDS
FGKAGAAAKFRISKTELKIGDMQPSSPVFAVGGSRLLPQTATGISLQSSEIKGLDLEAGH
FTSTTSQDETNRSGEIFANYAGVSAKSADFVGGKYSITDNLGVALYGAKLEDIWNQYYAN
VNYALPLGGDQSLAFDANLYRTVDEGSAKAGSISNTAFSGSVAYSFMAAHTLTVALQKIN
GDTPFDYIGTGNNNRGGDSIFLNNSIQYSDFNGPNEKSAQIRYDLNMAPYGVPGLSFMTR
YIKGWDIDGSNAPTNGPYGYYGADGKHHETNFEAKYVLQSGPAKDLSFRIRQAWHRANAD
QGEGDVNEFRLIVDYPISIL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgatgaagtggagcgcaatcgcactggccgttgcggcggcagccagcacccaa
ctggcatcggctgcgccgtttgtcagcgaccaagccgaagccaagggcttcgttgaaggc
agttcgctgaacctgaaagcacgcaactactactacaaccgcgacaagaaagctggcgca
gttgacgacaaagactggactcagggtttctggggtatctacaactccggctacactcaa
ggcactgtcggtgtcggtgttgacgcctttggttacctcggcttcaacctcgacggcagc
gacaagtactccggctccggcaacctgcagaccgacagtcaaggccgcaactccgacagc
ttcggcaaagccggtgccgccgccaaattccgcatttccaaaaccgagctgaaaatcggc
gacatgcagcctagcagcccggtattcgcagttggcggctctcgcctgctgccacagacc
gccaccggtatcagcctgcaaagcagcgaaatcaagggcctggatctggaagccggtcac
ttcacttcgaccaccagccaggatgaaaccaaccgtagcggcgaaatcttcgccaactac
gctggcgtgagcgccaaatctgccgatttcgtcggcggcaagtactcgattaccgacaac
ctcggtgtagccctgtacggcgccaagcttgaagacatctggaaccagtactacgccaac
gtgaactacgccctgccactgggcggcgatcagtccttggcattcgacgccaacctgtat
cgcaccgttgacgaaggctcggccaaggccggctcgatcagcaacacggccttctccggc
tcggtcgcttactcgttcatggcagctcacaccctgactgtagccctgcagaaaatcaac
ggtgacacaccgttcgactacatcggcaccggcaacaacaaccgtggcggcgactcgatc
ttcctcaacaactcgatccagtactccgacttcaacggcccgaacgagaaatctgcccag
atccgctacgatctgaacatggcaccttacggggttccaggcctgagcttcatgacccgc
tacatcaaaggctgggacatcgacggcagcaacgctccaaccaatggcccttacggctat
tacggcgcagacggcaaacaccacgaaaccaacttcgaagccaaatacgtactgcagtcc
ggcccggccaaggatctgtcgttccgtatccgtcaagcatggcaccgcgccaatgctgac
cagggcgaaggtgatgttaacgagttccgcctgatcgtcgactacccgatctcgattctg
taa
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