Pseudomonas sp. StFLB209: PSCI_3264
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Entry
PSCI_3264 CDS
T03623
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pses
Pseudomonas sp. StFLB209
Pathway
pses03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSCI_3264 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pses03400
]
PSCI_3264 (ruvB)
Enzymes [BR:
pses01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSCI_3264 (ruvB)
DNA repair and recombination proteins [BR:
pses03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSCI_3264 (ruvB)
RecFOR pathway proteins
PSCI_3264 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_22
nSTAND3
AAA_14
AAA_3
AAA_16
TIP49
RNA_helicase
ABC_tran
AAA_17
AAA_28
Rad17
NTPase_1
NB-ARC
AAA_18
NACHT
AAA_24
RsgA_GTPase
AAA_25
NPHP3_N
AAA_19
TsaE
DUF87
Sigma54_activ_2
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BAP43966
UniProt:
A0A077LJB9
LinkDB
All DBs
Position
3674215..3675273
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AA seq
352 aa
AA seq
DB search
MIEADRLITASGGRDRDEQFDRAIRPLSLADYIGQPTVREQMELFIQAARGRSESLDHTL
IFGPPGLGKTTLANIIAQEMAVSIKSTSGPVLERPGDLAAILTSLEPNDVLFIDEIHRLS
PIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQ
RLEFYNIADLSTIVARSANILGLVIEPEGAFEIARRARGTPRIANRLLRRVRDFAQVRGN
GQITRQAADQALNLLDVDEHGFDHQDRRLLLAMIEKFDGGPVGVDSLAAAISEERHTIED
VLEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNIPSRMGEMPATGEPVDDNAD
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
gtgatagaagccgatcgcctgataactgccagcggggggcgcgaccgggacgagcagttc
gaccgcgccattcgcccgctgagcctggccgactacattggccagcccaccgtgcgcgag
cagatggaactgttcattcaggccgcgcgagggcgcagtgagtccctcgaccacaccctg
atcttcggtccgcccggccttggcaagaccacgctggccaatatcattgctcaggagatg
gcggtctcgatcaagagtacctccggaccggtgctggagcggcctggcgacctggcagcg
atcctgaccagcctcgaacctaacgatgtactgtttatcgacgagatccaccggctttcg
ccgattgtcgaagaagtgctgtatccggcgatggaagacttccagctcgacatcatgatt
ggcgaggggccggcagcccgttcgatcaagctggacctgccgcctttcaccctggttggt
gccaccacccgtgccggcatgctgaccaatccactgcgtgatcgcttcggaatcgtgcag
cgtctggagttctacaacattgccgacctgtcgaccattgtcgcgcgctcggccaatatc
ctcgggctggtcatcgagcctgagggcgcctttgagatcgcccgccgggcgcgcggtacg
ccgcgaatcgccaaccgtctgctgcgccgggtacgcgatttcgcgcaggtgcgcggcaat
ggccagatcactcggcaggcggcggaccaggccttgaacctgctggatgtcgatgagcat
ggttttgatcatcaggaccgccgcttgctgctggccatgattgagaaattcgacggtggt
ccggtgggggtcgacagtctcgcggccgcgatcagtgaagagcgccataccattgaagat
gtacttgagccctacctgatccagcaggggtatatcatgcgtacccctcggggccgagtc
gtcactcgccatgcgtatttgcatttcgggctgaatattccgtcacgaatgggcgaaatg
ccagctaccggggaacctgtagatgataatgccgactaa
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