Pseudomonas sp. StFLB209: PSCI_4814
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Entry
PSCI_4814 CDS
T03623
Name
(GenBank) ECF subfamily RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pses
Pseudomonas sp. StFLB209
Pathway
pses02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSCI_4814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pses03021
]
PSCI_4814
Transcription machinery [BR:
pses03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSCI_4814
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
GerE
HTH_24
TnsD
DUF8462
Motif
Other DBs
NCBI-ProteinID:
BAP45516
LinkDB
All DBs
Position
5438256..5438789
Genome browser
AA seq
177 aa
AA seq
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MLAIHAMSDVPPATSAAHLSMIEALYSSHHSWLYSMLRNKLGNAMDAADLAQDTFTRILA
SRVTRIEQPRAYLHCVAKGILVNWYQRKALERAYLEALAQLPEPEVPSPEVRLMVLETLH
DIDAMLDALPPLVKRTFLLSQIAGLKYQDIATELNISLISVKRYMKQAFVQCLLLVE
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgctagccattcacgccatgagtgatgtcccaccagcgacttccgcggcccacctgagc
atgatcgaagccttgtacagcagccatcacagctggctgtacagcatgctgcgcaacaag
ctgggcaatgccatggatgcggcagatctggctcaggataccttcacccggatcctggcc
tcacgcgtgacccgcatcgaacagccgcgtgcttacctgcactgtgtggccaagggcatt
ctggtcaactggtatcagcgcaaggcgctggagcgcgcctaccttgaggcgcttgcgcag
ctgcctgagcctgaggtgccatcgcccgaggtgcggctgatggtgctggagacgctgcat
gacatcgacgccatgctcgatgcgctgccgccgctggtgaagcgcaccttcctgctctcg
cagatcgccggcctcaagtatcaggacatcgccaccgaattgaacatctcgctgatcagc
gtcaaacgctacatgaagcaggccttcgtccagtgcctgttgctggtcgaatga
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