Pseudomonas sp. StFLB209: PSCI_5045
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Entry
PSCI_5045 CDS
T03623
Name
(GenBank) type VI secretion protein, EvpB/family
KO
K11900
type VI secretion system protein ImpC
Organism
pses
Pseudomonas sp. StFLB209
Pathway
pses02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSCI_5045
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pses02044
]
PSCI_5045
Secretion system [BR:
pses02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSCI_5045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
BAP45747
UniProt:
A0A077LNV8
LinkDB
All DBs
Position
complement(5687415..5688899)
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AA seq
494 aa
AA seq
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MNTQTATRNPSGDQPDSLLDSIIAQTRLNPEDEAWGIARRGVSAFIAELLKPHNSAEPVK
KALADRMIAEIDARLSQQVDQILHHPDFQALESAWRGLKLLVERTDFRENIKIEILNVSR
QDLLEDFEDSAEVMQSGLYKHVYTAEYGQFGGQPVAAMIANYYLSPSAPDIKLMQYVASV
ACMAHAPFIAATGPGFFGLESFTGLPDLKDLRDHFEGPQFAKWQSLRQSEDARYLGLTLP
RFLLRNPYDPEENPVKSFVYRETVAASHEHYLWGNTAYAFATRLTDSFARFRWCPNIIGP
QSGGAVEDLPLHHFQSMGEIETKIPTEVLVSDRREFELAEEGFIALTMRKGSDNAAFFSA
SSVQKPKFFGNSAEGKNAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERSDLEL
ELNKWIRQYIADQENPGAEVRGRRPLRAAQISVSDVEGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKDVSQ
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaatacccagaccgcaacccgtaacccgtccggtgaccagcccgacagcctgctggac
agcatcatcgcccagacccgcctgaatcccgaagacgaagcctggggtattgcccggcgc
ggcgtgtcggcgttcatcgccgaactgcttaaaccgcacaacagcgccgagccggtgaag
aaagccctggccgaccggatgatcgccgagatcgatgcgcggctcagccagcaagtcgac
cagattctccaccaccccgattttcaggcactggagtccgcctggcgcggcctcaagctg
ctggtcgagcgcacggactttcgcgagaacatcaagatcgaaatcctcaatgtctcgcgc
caggacctgctggaagacttcgaagactctgccgaggtgatgcagtcgggcttgtacaag
cacgtgtacaccgccgaatacgggcagttcggtggccagccggtggcggcaatgattgcc
aactactatctgtcgcccagcgccccggatatcaaactgatgcagtacgtggccagtgtg
gcctgcatggcccatgcgccgttcattgctgccaccggtcccgggtttttcggcctggaa
agttttactggcctgcccgacctcaaggacctgcgtgatcactttgaagggccgcagttc
gccaaatggcagagcctgcgccagtccgaagatgcccgttaccttggccttaccctgccg
cgctttctgctgcgcaacccttacgatccggaagaaaacccggtcaagtcgttcgtctac
cgcgaaaccgtcgccgcgagccacgagcactatctgtggggcaacacggcgtatgccttc
gccacccggctgaccgacagctttgcgcggtttcgctggtgcccgaacatcatcggcccg
cagagcggcggcgcagtagaagacttgccgctgcaccatttccagagcatgggcgaaatc
gagaccaagatccccacggaagtgctggtctccgaccgtcgtgaattcgagctggccgag
gagggcttcatcgctctgaccatgcgcaagggcagcgataacgcggcgttcttttctgcc
agttcggtgcagaagcccaagttcttcggcaacagcgccgagggcaagaacgctgagctg
aactacaagctgggcacgcaactgccgtacatgatgatcgtcaaccggctggcgcattac
ctcaaggtgctgcagcgcgagcagcttggatcatggaaagagcgttccgatcttgagctg
gaactcaacaagtggattcgccagtacatcgccgaccaggaaaaccccggtgccgaagtc
cgtggccggcgcccgctgcgtgccgcgcagatcagcgtcagtgacgtcgagggcgagccg
ggctggtatcgggtgagcctcaacgtgcgcccgcatttcaaatacatgggcgctgatttc
accttgtcgctggtcggcaaactggacaaggacgtcagccagtga
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