Entry |
|
Symbol |
oprD
|
Name |
(GenBank) outer membrane porin protein OprD precursor
|
KO |
K18093 | imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-] |
|
Organism |
pses Pseudomonas sp. StFLB209
|
Pathway |
|
Module |
pses_M00745 | Imipenem resistance, repression of porin OprD |
|
Brite |
KEGG Orthology (KO) [BR:pses00001]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSCI_5137 (oprD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PSCI_5137 (oprD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:pses02000]
PSCI_5137 (oprD)
01504 Antimicrobial resistance genes [BR:pses01504]
PSCI_5137 (oprD)
Transporters [BR:pses02000]
Other transporters
Pores ion channels [TC:1]
PSCI_5137 (oprD)
Antimicrobial resistance genes [BR:pses01504]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:M00745]
PSCI_5137 (oprD)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
5804698..5806023
|
AA seq |
441 aa
MNAKQWSAIALAVSAAASQLAHAETIEDQAEAKGFVEGSSLSVLARNQYFNRDRQDGATD
NRDWTQGFIGNYSSGFTEGTIGVGIDAFGHFALKLDAQEGDSGTGNLPLDRNGKAEDSFG
SAGAAVKLRLSKTQLRYGNMQPTAPVFAVGGTRLLPQTATGFELKSSEIEGLDLEAGRYT
STNSNVTTNQDHDIYALYANVTARKATFAGAVYQLTPNWTASLYGAQFEDVWNQYYANTN
YVLALSGDQSLTFDANLYRTLDEGQAKAGSINNTTASLSATYAFLSAHSITLSAQKVHGD
TPFDYLAVGNNGNGEGGDSIFLANSIQWSDFNGPNEKSFGIRYNLDMATYGVPGLSFMAR
HVRGYDVDGSKVSADSAYAGLYGDDGKHNETDIEAKYVVQTGPAKDLSFRIRQAFHRANS
DQGEGDLSEFRLIVDYPISVL |
NT seq |
1326 nt +upstreamnt +downstreamnt
atgaatgcaaaacaatggagcgccatcgcactggctgtttcggccgccgcgagccagctg
gctcacgcagaaacaatcgaagaccaggccgaggccaaaggattcgtcgaaggcagcagc
ctctcggtactggctcgtaaccagtacttcaaccgtgaccgtcaggatggcgccaccgac
aaccgcgactggacccaggggttcatcggcaactacagctccggtttcaccgagggcacc
attggcgtgggtatcgatgccttcggccacttcgccctcaagctcgatgcccaggaagga
gacagcggcaccggcaacctgccactggaccgcaacggcaaggctgaagacagttttggt
agcgccggtgccgccgtaaaactgcgcctgtccaagacccagttgcgctacggcaatatg
caacccaccgcgccggtgttcgctgtgggcggcacccgcctgctgccacagaccgccacc
gggttcgaactcaaaagcagcgaaatcgaagggctggatctggaagccggccgttacacc
agcaccaacagtaacgtgaccaccaaccaagaccacgacatctacgcgttgtacgccaat
gtcacggcgcgcaaagccaccttcgccggcgcggtctaccagctcacgccgaactggacc
gccagcctgtacggtgcgcagttcgaagatgtatggaaccagtactacgccaacaccaac
tatgtgctggcgttgtccggtgaccagtcgctgaccttcgacgccaacctgtaccgcacc
ctggatgagggccaggccaaagccggctcgatcaacaacaccaccgcatcgctgtcggcg
acctatgcgttcctgagcgcccattcgatcaccctgagcgcccagaaagtccatggcgac
acgccgttcgactatctggccgtcggcaataacggtaacggcgaaggtggcgactcgatc
ttcctcgccaactcgatccagtggtcggacttcaacggcccgaacgagaaatcctttggc
attcgctacaacctcgacatggcgacttacggcgtgcccggcctgagcttcatggcgcgg
catgtgcgcggctatgacgtcgatggcagcaaggtctcggccgacagcgcttacgcgggt
ttgtacggtgacgacggcaagcacaacgaaaccgatatcgaagccaagtacgtggtccag
accggcccggccaaggatctgtcgtttcgtatccgccaggccttccaccgcgccaacagc
gaccagggtgaaggtgacctgtccgagttccgcctgatcgttgactaccctatcagcgtt
ctctaa |