Pseudomonas sp. StFLB209: PSCI_5465
Help
Entry
PSCI_5465 CDS
T03623
Name
(GenBank) regulatory protein, LysR substrate-binding protein
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pses
Pseudomonas sp. StFLB209
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pses03000
]
PSCI_5465
Transcription factors [BR:
pses03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PSCI_5465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
Motif
Other DBs
NCBI-ProteinID:
BAP46167
UniProt:
A0A077LQ20
LinkDB
All DBs
Position
complement(6178688..6179578)
Genome browser
AA seq
296 aa
AA seq
DB search
MNVKHLRAFVAVAECLSFAQAGERLHLSQPALSLTIKGLEESLGGQLLIRTTRSVNLTPE
GETLLPLARQLLADWDNTEELLHQRFTLQMGKVSLAAMPSYAGNRLPAALKVFRERYPRV
NIAVHDVINEEVLEMVRQRRVELGIGFEPEPGHSLHFTPFCVDRFVAVVPADSPLAGCAE
LHWSELLKEDFIALQRPSAVRLLLEQSVAAQHGRLAVAFESHQLATVGRMVASGLGVSAV
PALCIEQMHELGACCIPLVGPRIERRIGLMTLADQQLSVAAQALREVLIEQASMRR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcaaacacctgcgcgccttcgtggcggttgccgaatgcctgagctttgcccag
gccggtgagcgcctgcacctgtcacaaccggccctgagcctgacgatcaaggggcttgaa
gaatcgctgggggggcagttgctgattcgcaccacacgcagcgtcaacctcaccccggaa
ggcgaaaccctgctgccgctggctcgccagttgctggctgactgggacaacaccgaagaa
ttgctgcaccagcgttttaccctgcaaatgggcaaggtttcattggcggcgatgccttcg
tatgccggcaaccgtttgccggcggccttgaaggtgttccgcgagcgttacccgcgggtc
aatatcgcggtgcacgatgtgatcaacgaagaggtgctggagatggtccgccagcggcgg
gtcgaactgggcatcggtttcgagccggagcctggccactcactgcatttcacgccgttc
tgcgtagaccgtttcgttgccgtggtgcctgccgattcccccctggccggatgtgccgag
ttgcactggagtgaattgctcaaagaggacttcatcgccttgcaaagaccttcggcagtg
cgcctgctgctggagcaatcggtggctgcgcagcatggacggctggcggtggccttcgag
agtcatcagttggcgacggtgggacggatggttgccagtggtctgggcgttagtgccgtg
ccggcactgtgtatcgagcagatgcacgaactgggcgcctgctgcatcccgctggtaggg
ccgcgcatcgagcggcgcattggcctgatgaccttggccgatcagcagttgtcggtggcg
gcccaggccctgcgtgaggtgttgatcgaacaggcatcaatgcgccgatag
DBGET
integrated database retrieval system
