Entry |
|
Symbol |
fadB
|
Name |
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
|
KO |
|
Organism |
pses Pseudomonas sp. StFLB209
|
Pathway |
pses00280 | Valine, leucine and isoleucine degradation |
pses00907 | Pinene, camphor and geraniol degradation |
pses01110 | Biosynthesis of secondary metabolites |
pses01120 | Microbial metabolism in diverse environments |
|
Module |
pses_M00957 | Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA |
|
Brite |
KEGG Orthology (KO) [BR:pses00001]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PSCI_5482 (fadB)
00650 Butanoate metabolism
PSCI_5482 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PSCI_5482 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PSCI_5482 (fadB)
00310 Lysine degradation
PSCI_5482 (fadB)
00380 Tryptophan metabolism
PSCI_5482 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PSCI_5482 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PSCI_5482 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PSCI_5482 (fadB)
00930 Caprolactam degradation
PSCI_5482 (fadB)
Enzymes [BR:pses01000]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PSCI_5482 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PSCI_5482 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PSCI_5482 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PSCI_5482 (fadB)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(6196089..6198254)
|
AA seq |
721 aa
MIYEGKAITVTALEGGIVELNFDLKGESVNKFNRLTLDELRQVVDTLKADASVTGVIVTS
GKDVFIVGADITEFVDNFQLPDAELIAGNLQANRIFSDFEDLGVPTVAAINGIALGGGLE
MCLAADYRVMASGAKVGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIASGKENTAEDAL
KVGAVDAVVEADKLRAAALDLIRRAISGEFDYKARRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAASFGRDKALEVEAAGFVKMAKTSAAQSLIGLFLNDQEL
KRKAKAYDAQAREVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGNRVEKGRLTPAKMAEALNAIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEEQVG
ENTILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEQAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYDAKRLGQKNGKGFYAYETDKKGKP
KKVTDPEVLDVLKPIVYEQRELSDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADRYAELGALYEPTAKLREMARTGQRFFGQAPVK
E |
NT seq |
2166 nt +upstreamnt +downstreamnt
atgatttacgaaggtaaagccatcacggttacggctcttgaaggtggcatcgtcgaattg
aatttcgatctcaagggtgagtccgtcaacaagttcaatcgccttaccctcgacgagttg
cgtcaggtggtcgataccctcaaggccgatgcgtcggtcaccggggtgatcgtcaccagc
ggtaaggatgtcttcattgtcggcgccgatatcaccgagttcgtcgacaatttccagttg
cccgacgccgagctgatcgccggcaacctgcaggccaaccggatcttcagcgactttgaa
gacctgggtgtgccgactgtggccgcgatcaatggcattgcactgggcggtggcctggaa
atgtgcctggcggccgactaccgagtcatggccagcggtgccaaagtcggcctgccggaa
gtcaagctgggcatctaccccgggtttggcggcacagtgcgcctgccacgtctgatcggt
gccgacaacgccatcgaatggattgcttcgggtaaggaaaacaccgccgaagatgcgctg
aaagtcggtgcagtcgatgccgtggtcgaggccgacaagctccgcgcagcggcgctggat
ctgatcaggcgcgcgatcagcggcgagttcgattacaaggccaggcgccagcccaagctc
gaaaagctcaagctcaatgcgatcgagcagatgatggccttcgagacagccaagggcttt
gtcgccggtcaagccggccctaactacccggcgccggtcgaagcgatcaagaccattcag
aaagctgccagtttcggtcgtgacaaggcacttgaagtcgaggccgcaggcttcgtcaaa
atggccaagacctctgccgcgcagagcctgattggcctgttccttaacgatcaggagctc
aagcgcaaggccaaggcctatgatgcgcaagcccgcgaggtcaagcaggcggcggtgctg
ggcgcgggcatcatgggaggcggcatcgcctaccagtcagcagtcaaaggcacgccgatc
ctgatgaaggacatccgcgaagaggccatccagctgggtctcaacgaagcgtccaagctg
cttggtaaccgggtcgagaaaggccgcctgacgccggcaaaaatggccgaagcgctcaat
gccattcgtccgaccctgtcttacggcgacttcggccacgtcgatctggtggtcgaagct
gtggtggagaatcccaaggtcaagcaggcggtgctggctgaggtggaagaacaggttggc
gaaaacaccatcctggcgtcgaacacctcgaccatctccatcaacctgttggccaaggcg
ctcaaacgcccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgaacaagccgtggcaaccaccgttgcc
tatgccaagaaaatgggcaagaacccgattgtggtcaatgactgcccgggctttttggtc
aaccgggtgctgtttccgtattttggcggttttgcccggctggtcagtgccggtgtcgac
ttcgtgcgcattgacaagatcatggaaaaattcggctggccgatgggcccggcgtacctg
atggacgtggtcggtatcgacaccggccaccatggtcgcgacgtgatggctgaaggcttc
ccggatcggatgaaagacgaccgccgctcggctatcgatgtcctgtatgacgccaagcgt
cttgggcagaagaacggcaagggtttctacgcgtatgaaaccgacaagaagggcaagccg
aagaaggtcaccgaccctgaggtgctcgacgtgctcaagccgattgtctacgagcagcgc
gagctgagcgatgaggacatcatcaactggatgatgatcccgctgtgcctggagactgtc
cgctgccttgaagacggtatcgtcgagacggccgccgaggctgacatggggctgatctac
ggcattggcttccctccgttccgtggtggggcactgcgttacatcgattcgattggcgta
gctgaattcgtggccctggctgaccgctatgccgaactgggcgccctgtatgaaccgacc
gcgaaactgcgtgagatggcccgtaccggccagcgtttcttcggtcaagcgccagtcaag
gagtaa |