Pseudomonas sp. StFLB209: PSCI_5486
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Entry
PSCI_5486 CDS
T03623
Name
(GenBank) SLT protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pses
Pseudomonas sp. StFLB209
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pses01011
]
PSCI_5486
Enzymes [BR:
pses01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PSCI_5486
Peptidoglycan biosynthesis and degradation proteins [BR:
pses01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PSCI_5486
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
Motif
Other DBs
NCBI-ProteinID:
BAP46188
UniProt:
A0A077LRR5
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Position
6201998..6203926
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AA seq
642 aa
AA seq
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MRGRLFSLVSCLLLSATAAMQVQAADITQQRKLYDEAKRALAKGDTGPYMRSAAALADYP
LQPYLEYDELTARLKSASNAEIEKFLAEHGDLPQANWMKLRWLRWLAERGDWQTFVKYYD
EKMNFTELDCLYGQYQINNGQRAEAYASAEKLWMTIKSLPGSCDTLFAQWAAAGQLTEQK
RWQRAKLAAQARNYSLATTLVNSLNSLAPQGKLLLAVAQKPEMLDNPAQFRPVDEAMSDV
VGLGLRRLARQDPPKTLAMLDSYATTMHFSKEEKVEIAKEIGLTLARRYDDRALEIMSRY
DPDLHDDTVSEWRMRLLLRLGRWQEAYDLARRLPADLADTNRWRYWEARALELAQPGNPQ
IPALYKQVAQERDFYGFLAADRTQSPYQLNNKPLVLSQATINKVRNTPGIRRALEFHNRG
EIVDGRREWYHVSRHFNRDEMVAQAKLAYDLKWYFPAIRTISQAKYWDDLDIRFPMAYRD
TLVREAKVRGLHSSWVFAITRQESAFMDDARSGVGASGLMQLMPATAKETAKRFNIPLAS
PQQVFNPDTNIQLGAAFLSQVHGQFNGNRVLASAAYNAGPGRVRQWLKGANHLAFDVWVE
SIPFDETRQYVQNVLSYSVIYGQKLNNPQPLVDWHERFFDDL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtcgtttgttcagcctagtatcctgtctgcttctttccgcaaccgctgccatg
caggtccaggcagcggatatcacccaacagcgcaaactctatgacgaggccaagagagcc
ctggccaaaggcgacaccggcccctacatgcgctctgcagcagcgctggccgactacccg
ttgcaaccgtatctggaatacgacgaactgaccgcccgtctgaagagcgccagcaacgcc
gaaatagaaaagtttctcgccgagcacggcgacctgccccaggccaactggatgaaattg
cgctggctgcgctggctggccgagcgcggtgactggcagaccttcgtcaagtattacgat
gaaaagatgaatttcaccgagctggactgcctgtacggccagtaccagatcaacaatggt
cagcgcgccgaagcctacgccagcgcagaaaaactgtggatgaccatcaagagcctgcca
ggctcgtgcgatacgctgttcgcccagtgggccgctgccggacaattgaccgagcagaag
cgttggcagcgcgccaagctggccgcccaggcacgcaactacagcctggcaaccacactg
gtcaacagcctcaattcgctggcaccgcagggcaagctgttgctggcggtggcgcagaaa
ccggaaatgctcgacaacccggcgcagttcaggccggtggacgaagccatgtcggatgtg
gtcggtctcggtctgcggcgcctggcccgccaggatccgccgaaaaccctggcgatgctc
gacagctacgccaccacaatgcacttctccaaagaagaaaaggtcgagatcgccaaggag
attggcctgaccctggcgcgtcgttatgacgaccgggcactggagatcatgagccgctac
gaccctgacctgcacgatgacaccgtcagcgaatggcgcatgcgcctgctgttgcgcctg
gggcgctggcaagaagcttatgacctggcacgccgcctgccggccgacctggccgacacc
aaccgctggcgctactgggaagcgcgtgcgctagagctggcgcaaccgggcaacccgcaa
attccggccttgtacaaacaagtcgcgcaagaacgggacttctatggttttctggccgcc
gaccgcacccagagcccgtaccagctgaacaacaaaccgctggttcttagccaggccacg
atcaacaaggtgcgcaacacccccggcattcgccgtgcgctggaatttcacaatcgcggc
gagatcgtcgatggccggcgcgagtggtatcacgtcagccggcatttcaaccgcgacgaa
atggttgcccaggccaaactggcctatgacctgaaatggtacttcccggcaatccgcacc
atcagccaggccaaatattgggatgatctggatatccgcttcccgatggcttatcgcgac
acgctggtgcgcgaagccaaagtgcggggcctgcattcgagctgggtatttgctatcacc
cgtcaggaaagtgcgttcatggacgacgcccgttccggcgtgggcgccagtggcctgatg
cagttgatgccggccacggccaaagagaccgcaaaacgcttcaatattccgctggcctca
ccgcaacaggtgtttaaccccgataccaatattcagttgggcgcggcgtttctgagccag
gtgcacgggcagttcaacggcaaccgggtattggcgtcggcggcctacaacgcaggtcca
ggacgggtgcgtcagtggctcaagggtgccaaccacctggcattcgatgtctgggtggaa
agcatcccgttcgacgagacgcgccagtatgtgcagaacgtgttgtcgtactcggtgatc
tacggccagaagctgaataacccgcagccgctggtggactggcacgaacgattctttgac
gatttgtag
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