Pseudomonas sp. StFLB209: PSCI_5530
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Entry
PSCI_5530 CDS
T03623
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pses
Pseudomonas sp. StFLB209
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pses03400
]
PSCI_5530
DNA repair and recombination proteins [BR:
pses03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSCI_5530
Archaeal homologous recombinant proteins
PSCI_5530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
AAA_15
nSTAND3
AAA_25
AAA_22
MMR_HSR1
cobW
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
BAP46232
UniProt:
A0A077LQ60
LinkDB
All DBs
Position
6256952..6260596
Genome browser
AA seq
1214 aa
AA seq
DB search
MKILAIRLKNLASLAGPFEVDFSAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LSRVGQSKVPDIDGEITTSDPRTLLRRGTGSGYAEVDFIGIDQRRYRARWETNRARDNAS
KKLQASRQILTDLDSEQVLSNQSKREFEQLVEQRLGLNFEQFTRAVMLAQSEFSAFLKAD
DKERSELLEKLTNTAIYSQLGKRAWLKASDAKKALEDLNLLASGVAPMPAQARAELDEQL
SLAQQQLKLAQQRLRELEQQQQWFGQLQRLGAETQATRHSLACAEQDWQDQAGERDKLGQ
LERLAPQRHRFVRRASLDAQRAPLAQHIARQQARHGELSAAHQQLQASRDMAHTTLLAAQ
QQASESRSRLQHAFDTQNTLSHQADALSKTRASQQQHEHDCQQAQQQLDSLLAQQQHVAQ
RLADITAQLDNSSALAPLTQAWSAWQGRLKSLTLTANRWRHGQQELPALTRRASDAEQQL
AEQRNALELLYREADCEVSAVTEQLQLLGGLLQDNRKQQRASEELERLWTSHQQLEQQRQ
GITDQLHKAGQEREQLAADGSAVNEQLKVAEQTLSVTRELLERQRLVRSAGVDALRNQLQ
DEQPCPVCGSIEHPWHQPEALLQGLAEHDESEQAGAEKAVEELKERRSLLREQYAVLTSR
MKDLLGQQDQLQSQQQALAKPLQEHPQAAALHAINEAERAAWLQRQQQQLTQVIEQDEQR
QQALLKLQQDAGRLQQQLQEAQQASQNANAQIEEQQRQLNSDHARLEEELGALQPILPSD
WLEALRNETSASVMRLEQQVVERLALLEQQQEQQQEQAERHKRVEQQQLELTARQQRQAE
LQQQVQSLSEQQQASQTLLGELLGGHASAEQWQQTLEQSIEQARAAEQLAAQGLQDNQAQ
SIQLAAELKASEQQQQALQDEAAGLDEQISAWRNSHAQLDDATLNALLEVDDAQLEELRQ
RLQAAEKALEQNRVLLHEREQRLSEHQAHFPELTDGAGLEQAAQQSREQCAVTEQQCADL
RAQVSEDQRRQQANGELQARIEQATAERLRWGRLAELIGSAEGDRFRKIAQAYNLDLLVH
HANAQLRQLVRRYRLKRGGSLLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVGVISHVQEMHERIAVQIRV
RRQGNGQSTLEVGG
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcttgccatccgcctgaagaacctggcatcgctggccggcccgttcgaggtc
gacttcagcgcagaaccgctggccagcgccggattgttcgccatcaccggcccgaccgga
gccggcaagagcaccctgctcgacgccctgtgcctggcactgttcggcgccgtgccacgt
ctgagccgggtcggccagtccaaggtgccggacatcgacggtgagatcaccaccagcgac
ccgcgcaccctgctgcgccgtgggaccggcagcggttatgccgaagtggacttcatcggc
attgatcagcgccgctaccgtgcccgttgggagaccaatcgcgcccgcgacaatgccagc
aaaaaactgcaggccagccggcagatcctgactgatctggacagcgagcaggtgctcagc
aatcagagcaaacgcgagttcgagcaactggtcgaacaacgcctgggcctgaatttcgag
cagttcacccgtgccgtgatgctcgcccagagcgaattcagcgcctttctcaaagccgac
gacaaagaacgcagcgaactgctggaaaaactcaccaatacggccatttacagccaactg
ggcaagcgcgcctggctcaaggccagcgacgcaaaaaaagcgctggaagacctcaacctg
ctggccagcggcgtggcccccatgcccgcccaggcccgtgccgagctggatgagcagttg
agcctggcccagcagcagctcaagctcgcccagcagcgcctgcgcgagctggaacagcaa
cagcagtggttcggccagttacaacggctgggcgcagagacccaggccactcgtcacagc
ctggcctgcgccgagcaagactggcaggatcaagccggcgagcgagacaagctcggccaa
ctggagcgcctcgcaccgcaacgccatcgctttgtccgacgcgccagcctggatgcgcaa
cgggcaccgttggcgcagcacatcgcccggcaacaggcccgccacggcgaactgagcgcc
gcccaccagcagttgcaagccagccgcgacatggcccacaccacactgcttgcagcccag
caacaggccagcgagtcacgaagccggctgcaacacgccttcgacacccaaaacaccctg
agtcatcaggccgacgcgctgagcaaaacccgcgccagccagcaacaacatgaacacgac
tgccaacaggctcagcagcaactggacagtttgctcgcccaacagcaacacgtcgcacaa
cgcctggccgacatcaccgcgcagctcgacaacagcagtgcactggcgcccctgacccag
gcctggagtgcctggcaaggccggctcaagtcactgaccctgaccgccaatcgctggcgc
cacgggcaacaggaactgccggccctgacccggcgtgccagcgacgccgaacagcaactg
gccgaacagcgcaacgccctggaactgctgtaccgcgaagccgactgcgaagtctcggcg
gtaaccgaacagctgcaattgctcggcggcctgctgcaagacaaccgcaagcaacagcgt
gccagcgaagaacttgagcggctgtggaccagccaccagcaattggagcaacaacgccaa
ggcatcactgaccagttgcataaagccggccaagagcgcgaacaactggccgccgatggc
agtgcggtcaacgagcagctcaaagtcgccgaacaaaccctcagcgtcacccgcgaactg
ctggagcgccagcgcctggtgcgcagcgccggggtcgatgcgctgcgcaaccagttgcag
gacgagcagccttgcccggtgtgcggcagcatcgagcacccttggcaccaacccgaagcg
ctgttgcaggggctggccgaacacgatgaaagcgaacaggccggcgccgaaaaggccgtc
gaagagctcaaggaacgccgcagcctgctgcgcgagcaatacgcggtgcttacctcacgc
atgaaagacctgctgggtcagcaggatcagttgcaaagccagcagcaagcattggcaaag
ccgttgcaggagcatcctcaggcagccgccctgcatgcaattaacgaggcagaacgcgcg
gcctggctgcaacgccaacagcagcagctcacccaggtcattgagcaggacgagcagcgc
cagcaggcgctgctcaagctgcaacaggacgccggccggctgcagcaacaactgcaagaa
gcccagcaagccagccagaacgccaacgcccagattgaagagcagcaacgtcaactcaat
agcgaccatgcgcgtcttgaagaagaacttggcgcattgcagccgatactgccaagcgac
tggcttgaggcactgcgcaacgagacctcggccagtgtcatgcggctggagcagcaagtc
gttgaacgcctggcgctgcttgagcagcaacaggagcaacagcaggagcaggctgagcga
cacaagcgcgttgaacagcaacaacttgaactcaccgctcgccagcaacgtcaggctgaa
ctgcaacaacaggtgcaaagcctcagcgaacaacagcaggccagccagacgctattgggc
gaactgcttggtggccatgccagcgccgaacaatggcagcaaacgctggaacagtcgatt
gaacaggcccgcgcagccgagcaactggccgcccaggggctacaggacaaccaggcgcag
agcatccagctggccgccgaactcaaggccagcgaacaacagcagcaggcgttgcaggat
gaggccgccggactcgatgagcagatcagcgcctggcgcaacagccatgcgcaactggac
gatgcgaccctcaatgccttactggaagtcgacgacgcgcagcttgaagaactgcgtcag
cgcttgcaggccgccgagaaagcgctggagcagaaccgggtcctgctgcacgaacgcgaa
cagcgcctgagcgaacatcaggcccactttccagagcttaccgacggcgccgggctggaa
caggccgcacagcaaagccgcgagcagtgcgcagtgaccgaacaacaatgcgctgatctg
cgtgcgcaggtcagcgaggaccagcgccgccagcaagccaatggtgagctgcaggcgcgt
atcgagcaggctacggccgaacgcctgcgctggggccgcctggcagaattgattggttca
gccgaaggcgaccgtttccgcaagatcgctcaggcttacaacctcgacctgctggtccat
cacgccaatgcccaattgcgccaactggtgcgccgctaccggctcaagcgtggcggcagc
ctgttgggcctgctggtgatggacactgaaatgggcgacgaactgcgttcggtgcattca
ctgtcaggcggcgaaaccttcctggtgtcgctggccctggcgctgggcctggcctcgatg
gcctccagcaccttgcgcattgaatcgctgttcatcgacgaaggcttcggcagtctcgac
cctgagtcactgcaactggccatggacgccctcgacggcctgcaagctcaggggcgcaag
gtcggggtgatttcccacgtccaggaaatgcacgagcgcattgccgtgcagattcgtgtc
cgccgccagggtaacggccaaagcaccctggaagtgggcggctga
DBGET
integrated database retrieval system
