Pseudomonas sp. StFLB209: PSCI_5561
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Entry
PSCI_5561 CDS
T03623
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pses
Pseudomonas sp. StFLB209
Brite
KEGG Orthology (KO) [BR:
pses00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pses03032
]
PSCI_5561
03400 DNA repair and recombination proteins [BR:
pses03400
]
PSCI_5561
Enzymes [BR:
pses01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PSCI_5561
DNA replication proteins [BR:
pses03032
]
Prokaryotic type
DNA Topoisomerases
PSCI_5561
DNA repair and recombination proteins [BR:
pses03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PSCI_5561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
BAP46263
UniProt:
A0A077LRT6
LinkDB
All DBs
Position
6292249..6293307
Genome browser
AA seq
352 aa
AA seq
DB search
MDATFMPDAIAADQLPPDLHYVDDSEPGFSRKLLRGKFAYFDLDGQRIRDKAEIQRINAL
AIPPAYTDVWICADPRGHLQATGRDARQRKQYRYHPRWREIRDQNKYARMIAFGSALPKV
RKQLEAQMSQPGMGRDKVIATVVSLLDATLIRIGNSRYARDNRSFGLTTLRNKHVDIKGS
EILFQFRGKSGVEHQISIKDRRMANIIKRCMELPGQNLFQYLDADGQRHGISSSDVNAYL
HTLTGADFTAKDYRTWAGSVLALTTLRKLDWEPESDAKKHIVEMVKNVARQLGNTPAVCR
KCYIHPAVLEGFVIGELAKLPRSRKRQGLSAEEVALAAFLQQLHAQSAGQRS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
gtggacgctaccttcatgccagacgccatcgccgccgaccagctcccccctgacctgcat
tacgtcgacgacagcgagcccggctttagccgcaagctgctgcgcggcaaatttgcctat
tttgacctggacggccaacggatccgcgacaaggccgagatccagcgcatcaacgccctg
gccatcccgccggcctataccgatgtgtggatctgcgccgacccgcgcggccatctgcag
gccaccggccgcgatgcgcgccagcgcaagcagtaccgctatcacccgcgctggcgggaa
atccgtgaccagaacaagtacgcgcgcatgattgccttcggcagcgccctgcccaaggtg
cgcaagcagcttgaagcgcaaatgagccagcccggcatgggccgcgacaaggtgatcgcc
accgtggtcagcctgctcgacgcgacgctgatacgcatcggcaactcgcgctacgcccgt
gacaaccgctcgttcggcctgaccacattgcgcaacaagcatgtggacatcaaaggcagc
gaaatcctcttccagtttcgtggcaaaagcggcgtggagcaccagatcagcatcaaggac
cggcgcatggctaacatcatcaagcgttgcatggagttgccgggccagaacctgtttcag
tatctggacgccgacggccagcgccacggcatcagctcatcggacgtcaacgcctacctg
cataccctgactggcgccgacttcactgccaaggactaccgcacctgggccggcagcgtg
ttggccctgacgaccttgcgcaagctggattgggaaccggaaagcgacgcgaagaagcat
atcgtcgagatggtcaaaaatgtcgcccgccagttgggcaacactccggcggtctgccgc
aagtgctatatccacccggcggtgctcgaaggcttcgtgatcggcgaactggccaaactg
ccgcgctcgcgcaaacgccagggcttgagcgccgaagaggttgccttggcagcctttctc
cagcagttgcatgcacagagcgccgggcagcgctcctga
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