KEGG   Pseudomonas sp. TCU-HL1: THL1_1070
Entry
THL1_1070         CDS       T05373                                 
Name
(GenBank) glmZ(sRNA)-inactivating NTPase
  KO
K06958  RNase adapter protein RapZ
Organism
pset  Pseudomonas sp. TCU-HL1
Brite
KEGG Orthology (KO) [BR:pset00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pset03019]
    THL1_1070
Messenger RNA biogenesis [BR:pset03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     THL1_1070
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_18 AAA_29 SKI AAA_33 CoaE Rad17 AAA_16
Other DBs
NCBI-ProteinID: AOE83618
UniProt: A0A1B3E247
LinkDB
Position
complement(1161535..1162392)
AA seq 285 aa
MRLIIVSGRSGSGKSTALDVLEDHGFYCIDNLPAGLLPELAEKALLHTELIEPKVAVSID
ARNLPSQLQRFPELLVEARNRHIKCDVLYLDAEHDTLLKRFSETRRRHPLTNDNRSLAEA
IRDEEVLLAPIADLADLKIDTTHLNLYQLRDSIKLRLLNQPEPGTAFLIESFGFKRGMPV
DADLVFDVRCLPNPYWKPELREHSGLEPAVAEYLAAQPDVEEMYQDILGYLSKWLPRFAA
SNRAYVTIAIGCTGGHHRSVYIAERLGSTLKPSLKNVQVRHRDLS
NT seq 858 nt   +upstreamnt  +downstreamnt
atgcgcctgatcatcgtcagcggccgctccgggtcgggcaagagcaccgccctcgacgta
ctcgaggaccacggtttctactgcatcgacaacctgccggccggcctgcttcccgagctg
gccgagaaggccttgctgcacaccgaactgatagagcccaaggttgccgtctccatcgac
gcgcgcaacctgcccagccagctacagcgctttcccgaactcctcgtggaagcgcgcaat
cgccatatcaagtgcgatgtgctgtacctcgatgccgagcacgacaccctgctcaagcga
ttctccgaaacgcgtcggcgccacccgctgaccaatgacaatcgctccctcgccgaggcc
attcgcgacgaagaggtcctgctggcccctatcgccgatctcgccgacctgaagatcgac
acgacgcatctcaacctctatcaactgcgcgacagcatcaagttgcgcctgctgaaccag
ccagagcccggtacggcgttcctgatagagtcgttcggcttcaagcgcggtatgcctgtg
gatgccgacctggtattcgacgtgcgctgcctgcccaacccttactggaaacctgagctg
cgcgaacactcagggctggaaccggccgtcgccgagtacctcgccgcccagccggatgtc
gaggagatgtatcaggatatcctcggctacctgagcaaatggctaccgcgcttcgccgcc
agcaaccgcgcctatgtcaccatcgccatcggctgtaccggtgggcaccaccgctcggtg
tacatcgccgaacgtctcggctcgaccctgaaacccagtttgaagaatgtccaggttcgc
caccgcgacctcagttag

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