Pseudomonas sp. TCU-HL1: THL1_1161
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Entry
THL1_1161 CDS
T05373
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pset
Pseudomonas sp. TCU-HL1
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pset03400
]
THL1_1161
DNA repair and recombination proteins [BR:
pset03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
THL1_1161
Archaeal homologous recombinant proteins
THL1_1161
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AOE83709
UniProt:
A0A1B3E2D9
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Position
1252135..1253367
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AA seq
410 aa
AA seq
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MWFPMRILHTSDWHLGQHFMGKTRQAEHQAFCRWLIEQVRERQIDAVLIAGDVFDTGAPP
SYAREQYNQFIVELRDTGASLVVLGGNHDSVAMLGESRTLLAQLDTRVVPSVGTDLDEQL
LVLKRRSGEPGAILCAIPFIRPRDVLQSQAGQSAADKQLSLQQAIQDHYQQLFALAGQRR
VELGGGLPIVATGHLTTVGASASESVREIYVGALEAFPTSAFPAADYIALGHIHRPQKVG
GLEHIRYCGSPIPLSFDEALQQKEVLLVELDSIGLHKIEALPVPRFQALHSLRGSLADLP
EQLARVAREGTPERPVWLEVQISTDDYLNDLQTRLVALCKGLPVEVLRIRRERGNTQPGL
QSEARETLDELNPEEVLDKRLEGEELDDTLRKHLQGLHREVLAGLQEEQA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtggttcccgatgcgcattctccatacctccgactggcacctgggccagcacttcatg
ggcaagacccgccaggccgagcaccaggccttctgccgctggctgatcgaacaggtgcgc
gagcggcagatcgatgcggtgctgatcgccggcgacgtgttcgacaccggggcgccgccc
agctacgcccgtgagcaatacaaccagttcatcgtcgaactgcgcgataccggcgccagc
ctggtggtactgggcggcaaccatgactcggtggctatgctcggcgaaagccgtaccctg
ctggcgcaactggatacgcgagtggtgccgtcggtggggactgacttggacgaacaattg
ctggtgctgaagcgccgttcgggtgagccgggcgccattctctgtgccattcccttcatc
cgcccgcgcgacgtgctgcagagccaggccgggcagagcgcggcggacaagcagctgtcc
ctgcagcaggcgatccaggatcactaccagcagctcttcgccctggccgggcagcgacgc
gtcgaactgggcggcggcctgcccatcgtcgccaccggccacctgaccaccgtgggcgcc
agtgccagcgagtcggtacgggaaatctacgtcggtgcgctggaagccttccccaccagc
gctttccccgcggcggactacattgccctcggacatatccacaggccgcagaaggtcggt
ggcctggaacacatccgctactgcggttcgcccattccgctgtccttcgacgaggcgctg
cagcagaaggaagtgctgctggtggagttggacagcatcggtctgcacaagatcgaggcg
ctgccggtaccgcgctttcaagccttgcactcactgcgtggaagcctggcggacctgcct
gagcaactggcccgggtggcgcgtgagggaactccggagcggccggtctggctggaagtg
cagatcagcacggacgattacctcaacgacctgcagacgcgcctggtagccctctgtaag
gggttaccggtggaggtcttgcgcatccgccgcgagcgcggcaatacccagccgggcttg
cagagcgaggcacgggagacgctggatgagctgaacccggaagaggtgctggacaagcgc
ctggagggcgaggagctggatgacaccttgcgcaagcatctccaggggttgcaccgtgag
gtgctggccgggctgcaggaggaacaggcatga
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