Pseudomonas sp. TCU-HL1: THL1_1296
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Entry
THL1_1296 CDS
T05373
Name
(GenBank) ATP-binding protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pset
Pseudomonas sp. TCU-HL1
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pset03400
]
THL1_1296
DNA repair and recombination proteins [BR:
pset03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
THL1_1296
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
ResIII
AAA_10
SLFN-g3_helicase
AAA_30
T2SSE
AAA_16
TrwB_AAD_bind
AAA_19
AAA_7
CbiA
AAA_6
SRP54
Hydrolase
nSTAND3
Zot
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AOE83844
UniProt:
A0A1B3E2T1
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Position
1398399..1399892
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AA seq
497 aa
AA seq
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MPDQRSLILGADPEGNAVSQAMKLANRHGLIAGATGTGKTVTLQRLAEVFSDAGVAVFAA
DIKGDLCGLGAAGNPQGKVAERIASMPWLGHQPQAYPVTLWDVAGQSGHPLRTTLSEMGP
LLLGNLLELTDSQQAALYAAFQVADREGLLLLDLKDLKALLNHLKDHPELLGEDRALFAG
ASAQALLRRLATLEQQGAEALFGEPALQLEDILQPDRDGRGRIHLLDASRLVHESPKVYA
TFLLWLLAELFEQLPERGDADKPVLALFFDEAHLLFTGTPKALQERLEQVVRLIRSKGVG
VYFVTQSPSDLPDDVLAQLGLRIQHGLRAFTAKEQKSLRAVADGFRPNPTFDTLSVLTEL
GIGEALVGTLEEKGTPAMVQRVAIAPPQSRIGPLNDSERAALVRGSPQAGRYDKPIDRES
AYEILTARAAPAPVNEPEQKAGKTATDSPGVGDLAGELLGSFASQAMKTAVRQAANQLGR
QLVRGLMGSLLGGSKRR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatcaacgttccctgattctcggcgctgacccagagggcaatgccgtctcccag
gccatgaaactggccaaccgtcacggcctgatcgccggcgccaccggcaccggaaagaca
gtgacgctgcagcgcctggccgaagtgttcagcgatgccggtgtggcggtcttcgctgcc
gatataaaaggtgatctctgtggcctcggcgcggcgggcaacccccagggcaaggtggcc
gaacgcattgcttccatgccctggctgggccatcaaccccaggcgtatccggtcaccctc
tgggatgtcgccgggcaatccggccaccccttgcgcaccacgctgagcgaaatgggcccg
ctgctgctgggcaacctgctggagctgaccgacagccagcaggccgcactttatgccgcc
ttccaggtggccgaccgcgaaggtctgctgctgctcgacctgaaggatctcaaggctctg
ctcaaccacctcaaggatcaccctgaactgcttggcgaggaccgcgcgctgttcgccggt
gcttcggcccaggccctgctgcgccgcctggccaccctggagcagcaaggtgccgaagcg
ctgttcggcgaaccggccctgcagctggaagacatcctccagccggaccgcgacggccgc
gggcgtattcatctgctggatgccagccgtctggtccacgaatcccccaaggtctatgcc
accttcctgctctggctgctggccgaactcttcgagcagttgcccgagcgcggcgatgcc
gacaagccggtgctggcgctgttcttcgatgaagcgcatctgctgttcacgggcacgccg
aaggcgttgcaggagcgtctggagcaggtggtgcggttgatccgctccaagggcgttggc
gtctacttcgtcacccagtcgccgagtgaccttccggacgatgtgctggcccagcttggc
ctgcgtatccagcatggcttgcgtgccttcaccgccaaggaacagaaatccttgcgtgcc
gtggccgacggcttccgtccgaatccgacattcgacaccctatccgtgctcaccgagctc
ggcattggcgaggccttggtaggcaccctggaagagaagggcacgccggctatggtccag
cgcgtggcgatcgcacctccgcagtcgcgaatcggtccgctgaacgacagcgaacgcgcc
gcgctggtgcgtggctcgccgcaggccggccggtacgacaagccgatcgaccgcgagtcc
gcgtacgaaatcctcacggctcgtgcagctccagcgccggtgaatgagcctgagcagaag
gctggcaagactgcgacggactcgcctggggtcggtgatctcgctggcgagctgctgggc
agtttcgccagccaggcaatgaagacggcggtacgccaggcggccaaccagttgggccgg
caattggtgcgcggcctgatgggctctttgctgggtggcagcaagcgtcgttga
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